Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0503 |
Symbol | |
ID | 4910288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 482824 |
End bp | 483216 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640124250 |
Product | hypothetical protein |
Protein accession | YP_001055397 |
Protein GI | 126459119 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1325] Predicted exosome subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTAA AGCCGGGCTT TGCATACTCT GTGAGATGCA GATATGTTGA ACTCAGCGTG GTGGTACACG CAACCGAGAG CTTAGACAAA GTCATTGACC TGCTGAAAAA GGCCTTCGGC GATCTACCCT TCGTCGTGGA AATCTACGAA GGCCACCACG GCAACCCGAT CTACCTAGTG ACGTCGTTTG TAGAAAACTG CGACACGTTG CTCGACAAGC TCTGTGGCTG GTTCAACGGC TCTATCCCGG CGACGCGGGG AGAAGATGAG GGCCTCTACT ACCTCCGCCT AGATAAACAA GCGCTGGCGG CTGGCGTGGT TAGACAAGCA TTCCACGACG ACGTAGTGAG ATTGAAGATT AGGGTTAAGG GGGAGATGTG CCGCTCCTCT TAG
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Protein sequence | MALKPGFAYS VRCRYVELSV VVHATESLDK VIDLLKKAFG DLPFVVEIYE GHHGNPIYLV TSFVENCDTL LDKLCGWFNG SIPATRGEDE GLYYLRLDKQ ALAAGVVRQA FHDDVVRLKI RVKGEMCRSS
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