Gene Pcal_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0503 
Symbol 
ID4910288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp482824 
End bp483216 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content53% 
IMG OID640124250 
Producthypothetical protein 
Protein accessionYP_001055397 
Protein GI126459119 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1325] Predicted exosome subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTAA AGCCGGGCTT TGCATACTCT GTGAGATGCA GATATGTTGA ACTCAGCGTG 
GTGGTACACG CAACCGAGAG CTTAGACAAA GTCATTGACC TGCTGAAAAA GGCCTTCGGC
GATCTACCCT TCGTCGTGGA AATCTACGAA GGCCACCACG GCAACCCGAT CTACCTAGTG
ACGTCGTTTG TAGAAAACTG CGACACGTTG CTCGACAAGC TCTGTGGCTG GTTCAACGGC
TCTATCCCGG CGACGCGGGG AGAAGATGAG GGCCTCTACT ACCTCCGCCT AGATAAACAA
GCGCTGGCGG CTGGCGTGGT TAGACAAGCA TTCCACGACG ACGTAGTGAG ATTGAAGATT
AGGGTTAAGG GGGAGATGTG CCGCTCCTCT TAG
 
Protein sequence
MALKPGFAYS VRCRYVELSV VVHATESLDK VIDLLKKAFG DLPFVVEIYE GHHGNPIYLV 
TSFVENCDTL LDKLCGWFNG SIPATRGEDE GLYYLRLDKQ ALAAGVVRQA FHDDVVRLKI
RVKGEMCRSS