Gene Pcal_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0490 
Symbol 
ID4909374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp469645 
End bp470016 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content52% 
IMG OID640124237 
ProductpaREP15, putative coiled-coil protein 
Protein accessionYP_001055384 
Protein GI126459106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.765931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCG CCGCCTCTAT CGCCATCGAG ACCGCCGTGA AACACGTGAT GGAGAAGATA 
AAGCGGGGCA AGAAGCTTAC CACAGAGGAC ATCCTCATAC TCTACCTAGG CTCAATATCA
GAGGACGTGA GGGCAATGCG CGCCGAGGCA ACCGAAAGAG AAAAAGCGCT AAGAGAGGAG
ATAGCGCAGT TAAGGAGAGA AATGTACGCC AGATTCGACG CCACAGACGC CAAGTTTGAC
GCCAAAATCG AGGAACTGCG TAAGGAAATG AACGCAAAGA TCGACGCCCT CTACGCCGAG
ATAAACCGCA AATTCGACGA ACTCTATCGA CTCCTAATAA CCGCCCTCAC ACAGAAAAGA
CAGGAGAGCT AA
 
Protein sequence
MDAAASIAIE TAVKHVMEKI KRGKKLTTED ILILYLGSIS EDVRAMRAEA TEREKALREE 
IAQLRREMYA RFDATDAKFD AKIEELRKEM NAKIDALYAE INRKFDELYR LLITALTQKR
QES