Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0487 |
Symbol | |
ID | 4908291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 467122 |
End bp | 467976 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640124236 |
Product | glycosyl transferase family protein |
Protein accession | YP_001055383 |
Protein GI | 126459105 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.843285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAGC CATTAGTATC AATAATAATA CCTACACGCA ACTCAGAGAA GACACTGCCC CTATGTTTAA GATCTATTGA AAAACAGACA TATAAAAATA TTGAAGTAAT TGTAGTAGAC AATTACAGCA AAGACAAGAC TGTAGAAATT GCGAAATCCT ATGGTGCGAG AGTGTACTTC AAGGGCCCTG AACGGTCTGC GCAAAAAAAC TTTGGTGCAC TCAAGGCCCA GGGAGACTAC GTCTACTTCA TAGACGCAGA CTTCGTCCTC CACGCCCGCG TAGTAGAGGA AGCGGTCTCC TTAGCTAAGG AGGGATACGA CGCAGTAGTA ATTTTGAACA TAAGCGATCC TCGCCCTAGT CTTGTGGCAA AGATTAGGTT TTATGAAAGA TTGAGTTATT ACGGCAGTGA AATGTATGAA GCAGCGAGGT TTATTAAGAA AGATCTTTTT TTAAAAGTTG GCGGTTTTGA TATAAGGCTT TACGCAAATG AAGATTATGA ACTCCATCAA AGACTTCTAA GGGCTGGTGC AAAGATTGCC AAAACAAAAA ATAGTTTTGA AATACATATA GGTGAACCGT CAAGTATAAA AGAATTCATA ATTAAGAATT TGTATTATGC ATCAAATATT AGTACATACT TTAGGAAAAA TCCAAATATT CGCCATATGA CACCTTTAAG GCCCACTTTC TTTAGGAAGA GCTTTATAGG ACACCTTGGG AGGAAATGGT TGCCAGGCCT ATTTTTAGTG ATTCTATTCA AAGTTTTACA AGCCACTGTA ATAGGGTTAG GTATTTTAAT AAAGTCCAAC GTTTTACCAT ATGAGAATAT ACAAAAACTT AGAAGAGTAA TTTAA
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Protein sequence | MTEPLVSIII PTRNSEKTLP LCLRSIEKQT YKNIEVIVVD NYSKDKTVEI AKSYGARVYF KGPERSAQKN FGALKAQGDY VYFIDADFVL HARVVEEAVS LAKEGYDAVV ILNISDPRPS LVAKIRFYER LSYYGSEMYE AARFIKKDLF LKVGGFDIRL YANEDYELHQ RLLRAGAKIA KTKNSFEIHI GEPSSIKEFI IKNLYYASNI STYFRKNPNI RHMTPLRPTF FRKSFIGHLG RKWLPGLFLV ILFKVLQATV IGLGILIKSN VLPYENIQKL RRVI
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