Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0478 |
Symbol | |
ID | 4909506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 458645 |
End bp | 459760 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640124228 |
Product | glycosyl transferase family protein |
Protein accession | YP_001055375 |
Protein GI | 126459097 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACTGCG TAACCCTCGT AATACCCACC CTAGACGAGG CCGAGGCCAT AGGCAAAGTG ATAGAGGAGG CCAGGAGAGC GGGCTTCACA AAGATACTAG TGGTAGACGG AGGCTCCAGG GACGGCACCC CCCAAATCGC CGCAGAGAAG GGCGCAGTCG TAATAGGGCA GAGGGGGAGG GGAAAGGGAG ACGCCATAGC CACAGCACTA GACTACGTGG ACACCCCCTA CCTCGTCGTA ATAGACGGAG ACTACACCTA CCCCCCAGAG GAGGCCGCCA AGCTAGTCGC ATACCTACGG CACTACGACC TAGTCCTAGG CGCGAGGCAG GGCCCCATGC CCCTCATCTA CCGCGTGGGA AACTGGCTAC TGGCAAGGGC CATATCCCTA ATGTACGGAG TGAGGCTGAG GGACCCCCTC ACAGGCATGT ACGCCGCCAG GACCGAGGTC CTCAGGCGAG CCGCCCCCAC AGCCCAAGGC TTCGACATAG AGACAGAGAT AATAGCCAAG GCAGTGGAAC AGGGCGCGTC GGTGAGAGAG GTGCCCATCC AGTACAGGAA GAGGCTAGGC CGCAAAAAGC TAAAGCCATG GCACGGCCTT CACATCCTCT GGCGCGCAGT GAGAGCCGCC TACACCGCCA ACCCACTCCT CGCCCTATAC CTCGCCGGAG CCCTCCTCGC CGCGCCAGGC CTCGCCCTAG GCGGATGGGT CGCCTACAGG CTATTCTACC AGGGAGTCCC CCACTACATG CTAGGCTTGT TAGCCCTCGG CCTACTCCTA CTCGGGTTGG TCTCCCTCGC CCTAGCCCCC CTAGCCGCCG CCGTGGTGAG ACTGAGGGCA CAAATCGCCC GCGCCACCCC CAGACAGGAG CCCACAGACT GCCTCCCACC ACTCCCACCA CCCCCACCAC CCCAGCCCAG GAGGCGCCCA ACCATCTGGG ACAGACTAGA GGCAACGGCC AGGGGGCTGA CAATAGCCTT CGCCGCGACC CTCTCCGCCG CCGCGTACTT CCTAGCCGTG GGAGACACGC CGACCGCGAA CAAGCTCGCC GAATACGCCT ACTACTTCCT CGCCGCCGCG ACTGTGATAT ATCTGGCAGT AGCCGCCAAA CAATGA
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Protein sequence | MDCVTLVIPT LDEAEAIGKV IEEARRAGFT KILVVDGGSR DGTPQIAAEK GAVVIGQRGR GKGDAIATAL DYVDTPYLVV IDGDYTYPPE EAAKLVAYLR HYDLVLGARQ GPMPLIYRVG NWLLARAISL MYGVRLRDPL TGMYAARTEV LRRAAPTAQG FDIETEIIAK AVEQGASVRE VPIQYRKRLG RKKLKPWHGL HILWRAVRAA YTANPLLALY LAGALLAAPG LALGGWVAYR LFYQGVPHYM LGLLALGLLL LGLVSLALAP LAAAVVRLRA QIARATPRQE PTDCLPPLPP PPPPQPRRRP TIWDRLEATA RGLTIAFAAT LSAAAYFLAV GDTPTANKLA EYAYYFLAAA TVIYLAVAAK Q
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