| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0462 |
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| Symbol | |
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| ID | 4910170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 444787 |
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| End bp | 445155 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124213 |
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| Product | HEPN domain-containing protein |
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| Protein accession | YP_001055360 |
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| Protein GI | 126459082 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCACCT ACGAGAAGTG GATAGAGAGA GCAAAGAGGT ACGCGGCGCT TGCCAGAGAG
ATGGCTACAA GAGGCTTCTA CCCCGAGGCT TGCCTCTTTG CCCAACAAGC CGCCGAGCTC
TACCTCAAGG GACTTTTGAT AAAGGCCACG GGGGCCAGGC CGTACACACA CTCCATTCTA
CACCTGCTCA GAAGCTACCT CGCCCTCTCG GGGCGCGAGC CCGGCGAAGA GGAGACGAGG
TGCGCCAAGC TTCTCACAGA GCACTACCTA GGGGCGCGGT ACCCCGACGC GAGGATGTTA
GAATACGACG ACAAAGACGC CGAGGAGTGC CTAAGATGCA TGGACGCGGT GCTCAATGCA
GCTGTATAG
|
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| Protein sequence | MPTYEKWIER AKRYAALARE MATRGFYPEA CLFAQQAAEL YLKGLLIKAT GARPYTHSIL
HLLRSYLALS GREPGEEETR CAKLLTEHYL GARYPDARML EYDDKDAEEC LRCMDAVLNA
AV
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