Gene Pcal_0460 details

Gene Information

• Locus tag: Pcal_0460
• ID: 4910090
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 443797
• End bp: 444435
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640124211
• Product: hypothetical protein
• Protein accession: YP_001055358
• Protein GI: 126459080

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 30
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGCGAGCG ACCTGAAGCG TCAGTTCCTC AAGTTGCTTG AGGAAGATGA GGAGTTTAGA 
TACGCCGTGG CGGGGCGCCT CGGCATATTA GAGGTATTAA AACGCCTAGA CGCCATAGCA 
GAAGAACAGA AAAACATAAA TCGAAACATA GAAAACATAA ATCAGAAAAT AGAAAAAACA 
TGGGAAGAGA TAGCCAAGAT CTGGGCCCAA ATTGAGAAAA TTTGGAAAGA GATCAAAGAC 
ATGAAGAAGA CGCTTAACAG GGTGGAGAAG ACTCTTGAGC ACATCACCAT AAGCATAGAG 
GAGGAGGCGC AGGAGGCTGT GGCTTGGCTA CTGTCGCAGA GGGGAATCAC CATGGAGATA 
GGCGATGTGA AAGTCGACGA AAAATACGAA TTCGACATCT ATGGCAGCAA TGGCCAAATC 
ACAGTAGTAG GAGAAGCTAA GACGAGGGCC TCGCCAAGGG CCGTAGGGAA GCTCCTAGAG 
AGGGTAGAAA AGGCCAAGAA GCTCAGGCCA GACATATTCA AAGGACGCGT AGTCCCAGTA 
ATCTACTGCT TAAAATACGT CGGAAACCCC AAAGAGGCAG AGGAGCGGGG GGTCTGGGTC 
ATAAAATCGG GAAAAGAACT CACAAAACCA CCACTATAA 

 

Protein sequence

MASDLKRQFL KLLEEDEEFR YAVAGRLGIL EVLKRLDAIA EEQKNINRNI ENINQKIEKT 
WEEIAKIWAQ IEKIWKEIKD MKKTLNRVEK TLEHITISIE EEAQEAVAWL LSQRGITMEI 
GDVKVDEKYE FDIYGSNGQI TVVGEAKTRA SPRAVGKLLE RVEKAKKLRP DIFKGRVVPV 
IYCLKYVGNP KEAEERGVWV IKSGKELTKP PL