Gene Pcal_0455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0455 
Symbol 
ID4909851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp438506 
End bp439663 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content57% 
IMG OID640124206 
Productproteinase inhibitor I4, serpin 
Protein accessionYP_001055353 
Protein GI126459075 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4826] Serine protease inhibitor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCAA TTGCCTTGGT ACTGCTAGAG GCGTTGTCGT CAAGCGTTGG AAGCCCGGCG 
GCCCCTCCGC CTAGAAATTG CTCGCCCTCT CCTGCCCTCA ACTTCAACGC CAGCGGCTAC
AACGAGTTCG CCGTGGAGTT TTACAAGAGG CTGGCCCTGA GCCACTTAGG CGAAAATTTC
GCCGTGTCTC CTTTTTCCGT TTACAAGGCC TTCGCCATGG TGTACGCAGG CGCTGGGGGC
GAGACTAGAG AGGAGATCAA GCGAGTTTTC GGCTTCGGCG AAGACCCCTG CGAAGTGGCG
CCAGCTGGCA GAGGCATGGA AGAGGCAACC TCAGCGTGGC TCCAGACGGG AGCGACATTT
ACACAGCAGT ACTTGGAAAA GCTTGCTTGT CTCTGCGCCG AGGCTCACCG CGTAGATTTT
CGCGGCAACT TTAAGGCCAC GGTCGAGGAG ATAAACAAGT GGGTTGAGGA AAAGACGCGC
GGCCTTGTAA AAGACCTAAT TCCGTCGAGT CCAAAGAGGG ACGTCGTAGC AGTGCTGGTG
TCGGCGCTGT ACTTTGAGGC AGGCTGGTGG CCGCGCTCCT TTTCCAGGGT GGGGGAGGGG
AGCTTCGCCG GGGCGGCGCA CCCCGTGGAG TACATGGCCC TCGACTTGAG GTCGTGCGGC
GACCCATCGT TGGTGGGCAA AATAGAGGAC AACATAACCG TGGTGAAGCT ACCGCTGAAG
AACACGGAGA CTGCCATGTA CATTGTCGTG CCGCTGGATT TCAAAGCCTA CGTGGCCTCG
TTGAATTATG AAAAACTCAG GGAAGATCTC TCCAATTTGA CGGCCGAGGT CGTGTACGTA
AAAATGCCGA TCTTTGTGGC AGAGTTTAAG GGTTCTGTAA AAGATGTGTT GAAAGAAATG
GGCATCATAA GGGCCTTTGA CCCATCTAAG GCCGACTTTT CGCCCATGGA CGGCTCCCGC
GACGTCTATC TAAGCGACGT ATTCCACGGG ACCTACGTCA AGGCCTATGA AAATGGGGTA
GTCGCCGCGG CGGCCACCGC GGTCGAAGTC GCTGTATGCG CCAAAGTAGG CGGTGCGGAG
GTGGTAGTGG ATAGGCCGTT TCTCTTCGTC TTGGCAGATG ACAGGGTCAT ATACTTCATA
GGCCACGTTG TCGGCTAG
 
Protein sequence
MGAIALVLLE ALSSSVGSPA APPPRNCSPS PALNFNASGY NEFAVEFYKR LALSHLGENF 
AVSPFSVYKA FAMVYAGAGG ETREEIKRVF GFGEDPCEVA PAGRGMEEAT SAWLQTGATF
TQQYLEKLAC LCAEAHRVDF RGNFKATVEE INKWVEEKTR GLVKDLIPSS PKRDVVAVLV
SALYFEAGWW PRSFSRVGEG SFAGAAHPVE YMALDLRSCG DPSLVGKIED NITVVKLPLK
NTETAMYIVV PLDFKAYVAS LNYEKLREDL SNLTAEVVYV KMPIFVAEFK GSVKDVLKEM
GIIRAFDPSK ADFSPMDGSR DVYLSDVFHG TYVKAYENGV VAAAATAVEV AVCAKVGGAE
VVVDRPFLFV LADDRVIYFI GHVVG