| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0422 |
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| Symbol | |
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| ID | 4908502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 404242 |
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| End bp | 405819 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640124174 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001055322 |
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| Protein GI | 126459044 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTCTAG CTCAACAACC AGCGCAGCCC ACAACCACTG CCGCCCCCAC CACGGCACGA
CCTACCACGG CTCCCACCCC CCAGCCCACT ACCCCCGCCA CGACTACTAC GCCGCAGGCA
ACGCCTTTGA CCATCACAAT AGGCGTCACA GACAAGGTGA CGGACCTCGA CCCGGCAAAC
GCCTACGACT TCTTCACTTG GGAAGTCTTG TACAACACCA TGGCGGGCCT CGTCAGGTAT
AAGCCAGGCA CTACGGAGAT AGAGCCAGAC CTCGCCGAGA GTTGGACTGT GCTCGAGGGG
GGCAAGGTGT GGGTCTTTAA GCTAAGGCCG AATCTCAAGT TCTGCGACGG GACGCCGCTG
ACCGCGGCCG ACGTCAAGAG GTCTATTGAG CGCGTGATGA AGATAAACGG CGACCCCGCG
TGGCTTGTCA CAGACTTCGT AGAAAAGGTG GAGGCCCCTA ACGCTACAAC GGTGGTATTC
TACCTACAAA AGCCAGTCTC CTACTTCCTA GCCCTAGCGG CTACGCCGCC CTACTTCCCG
GTGCATCCCA AATACGCTCC AGACAAGATT GACTCAGATC AAACGGCGGG CGGCGCGGGG
CCTTACTGTA TTAAGAGCTT TGTGAGAGAC CAGCAGATAG TCCTTGAGGC AAACCCCTAC
TACTACGGCC CCAAGCCCCA GGTTGGCCGG GTAGTGATTC GGTTCTATAA AGATGCCACC
ACTCTAAGAC TTGCCCTTGA GAGAGGGGAG GTGGACATTG CCTGGAGGAC TTTAAATCCG
CCCGACGTAG AGGCGCTGAG GGCCTCGGGC AAGTTCAACA TAGTGGAAAT ACCGGGCTCC
TTCATTAGGT ACATAGTGCT CAACCTCAAT ATGCCAGAGT TAAAAGACGT CAGAGTGAGA
CAAGCCCTCG CCGCGGCCGT GTGCAGAAGG GACATAGTCA ACGTGGTTTA CCGCGGCACA
GTTACGCCGC TGTACACGTT GATACCAGAG GGCATGTGGA GCTCTTACCC AGTCTTCAAA
GAGAAGTACG GCGATTGCAA CATCACGCTT GCAAAGACGT TGCTACAACA GGCTGGTTAC
AGCGAGTCCA AGAAGTTGAA CATTGAGCTG TGGTACACGC CTACTCACTA CGGCGACACT
GAGAAAGACC TCGCGGCGAT GTTGAAGCAA CAGTGGGAGG CCACGGGGAT GATCGCTGTC
ACAGTTAAAT CTGCCGAGTG GGCCACATAT GTGCAACAGC TCAGAAGCGG CGCATTGATG
GTCTCACTGC TCGGCTGGTA CCCCGACTAC ATAGACCCCG ACGACTACAC AACGCCGTTT
TTAAAGACTG GCGCAAATAA GTGGCTTGGA AACGGGTACA GCAACCCAGA GATGGACCAG
ATCTTAGACA AGGCGTCGGT GGAAATATCT CAGACTGCCA GAGAACAGCT TTACCTACAG
GCACAGCGCA TACTGGCCCA AGACGTGCCC ATAATACCGC TTATACAAGG CAAGTTGTAC
ATGGCGACGA GGCCGGGCAT ACAGGTAGTG GCAGACCCCA CAATGATATT CAGGTACTGG
ACCATCAAAG TCGGGTAG
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| Protein sequence | MFLAQQPAQP TTTAAPTTAR PTTAPTPQPT TPATTTTPQA TPLTITIGVT DKVTDLDPAN
AYDFFTWEVL YNTMAGLVRY KPGTTEIEPD LAESWTVLEG GKVWVFKLRP NLKFCDGTPL
TAADVKRSIE RVMKINGDPA WLVTDFVEKV EAPNATTVVF YLQKPVSYFL ALAATPPYFP
VHPKYAPDKI DSDQTAGGAG PYCIKSFVRD QQIVLEANPY YYGPKPQVGR VVIRFYKDAT
TLRLALERGE VDIAWRTLNP PDVEALRASG KFNIVEIPGS FIRYIVLNLN MPELKDVRVR
QALAAAVCRR DIVNVVYRGT VTPLYTLIPE GMWSSYPVFK EKYGDCNITL AKTLLQQAGY
SESKKLNIEL WYTPTHYGDT EKDLAAMLKQ QWEATGMIAV TVKSAEWATY VQQLRSGALM
VSLLGWYPDY IDPDDYTTPF LKTGANKWLG NGYSNPEMDQ ILDKASVEIS QTAREQLYLQ
AQRILAQDVP IIPLIQGKLY MATRPGIQVV ADPTMIFRYW TIKVG
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