| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0409 |
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| Symbol | |
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| ID | 4909266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 391753 |
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| End bp | 393384 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640124161 |
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| Product | hypothetical protein |
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| Protein accession | YP_001055309 |
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| Protein GI | 126459031 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.525054 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGT GGCTGGCGGT GTTGCTTCTC GCCACGTTGC TTGTGGCGGC TCAGCCCCTC
GCGGAGATTC TCAAGCTTAA AGTAGAGCCC TTACCCTGTC TGCTAAACTC AACATGTTCA
GCGTATAGAG CTACAGCTCT CATAAATGCC TCAGCCAGCG GGCAGTTGGC ACTTGGCGCA
TGGGCATTAG TAAAGGGGGA GTGGAAGGCG TTGGACTGGT GCTATCCCAC GGGCTCCGGC
CCCTGCACCT TTGTCATTGA GCTAAAGCCT GAGTACGAGG CCCTTGGATT CCCACTGTGG
ACAAACCAGC AAGGCCGGTG GGTGTGGGTG CAGAGCGTGG ACATATACGG CGTTAACGCC
GTGTGCACTA TGGCGTATAA GTGCCCAGAG ATTGACAAAG TGGAGGTGGA GAGGGGCGGG
GAGCTGGGCG GGTGGAGAGT GAGAGTCTAC GTCAAGTCTC CCTCGCAACG CATGAGAGTC
GCGTTGGACA TCGGCGGTAT GTATGTGGAA AAGGAGGTGG AACAACCCTT CGCAACGGCA
TGTACAACGC TGAGAGTGGA CTTTGGGCCA TACGACTTTC CACAAGGCAC TTGCGGCAGA
GTTAGGGTGT ATGGCGACTG TGGAATGGTC GAGAGACAAG TGTGTGCACA ATCTGCGGAT
AGCAATGTCG TAGTTGTTAG AGTAGCCGAT GTTGTAGAGG AGAAGTATGT TAAAGGGATT
GGTATAGTCA AAGTAAAAGC GCCGCACGTG TTAAAAGTTG GAGAGGAATA CCTAACCGAG
TTTAATATTC GTGTAAACCG TGAAGAGCTC GGAAGACTCA TCCAGCTCAT AAAGCGCGTG
TGCCAGTTGT TGTGTCAACT TCCTTGGTCA AAGCCTTTTA TGCCTGAGTC GTTATGCCAA
AAATGCAGCG ACCTTAGTAG CTACCTTGTT CTCCACGGGG GAGTTAGAGC TTATGCAAGC
GAAAGCGGAA GCGGCGGCGT TGCCCTCTTC CTAGCTCTTG GCCTTCAACA GACATATGGC
ACCATACCGG CTGGGCCAAA CCGCTACTTA GTCTTTTCAA ATATCGACGA GTTTTTTGCA
ATATACTACG TGGTCAAGGG CCTGCCGCCT CTCAGTTTAA CAGACCTAGA GTCTAAAGGA
GTCCCCATTT CGCTTAAGAT AACCCCCCTG GGCCCTGAGT CGTATAGGTT AACTGGCGGC
GAGGAGGAGA TAACGCTCCG CTATAAGATT CAGCTAGTTC CAAACACCGA ATATATGCTC
AACTTCAACA ACATAACCGC CGAATATAGC AAGCTACAAT ACTCCAACGA CATCCTCTCA
CGAGTAGAGG CGCTATCCGC CGCCGTAGAA AGAGCAGAGG GTCAGACAGC CACTGTAACT
ACAACGTCCA CAGCGTATGT GACGATACTT GTCACCACCA CTGCTACACT CCCCATCACC
ACAACCAAGG AAGTGACTAT GACGTCTCCC ATCGTCGTCA CTTCGCCCAC GGTCGTCACC
GTTCCCACCA CAGTCACTCA AACTACGACT GAGAGACTTG TCGTTAGAGA GACAGACGCG
GCGCTTTTAG CCGCAGTGGC AGTCGCGGCT TTGGCGGTGG GAGTATTAAT CGGGAGGGCG
AAAAAAGCGT AA
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| Protein sequence | MAKWLAVLLL ATLLVAAQPL AEILKLKVEP LPCLLNSTCS AYRATALINA SASGQLALGA
WALVKGEWKA LDWCYPTGSG PCTFVIELKP EYEALGFPLW TNQQGRWVWV QSVDIYGVNA
VCTMAYKCPE IDKVEVERGG ELGGWRVRVY VKSPSQRMRV ALDIGGMYVE KEVEQPFATA
CTTLRVDFGP YDFPQGTCGR VRVYGDCGMV ERQVCAQSAD SNVVVVRVAD VVEEKYVKGI
GIVKVKAPHV LKVGEEYLTE FNIRVNREEL GRLIQLIKRV CQLLCQLPWS KPFMPESLCQ
KCSDLSSYLV LHGGVRAYAS ESGSGGVALF LALGLQQTYG TIPAGPNRYL VFSNIDEFFA
IYYVVKGLPP LSLTDLESKG VPISLKITPL GPESYRLTGG EEEITLRYKI QLVPNTEYML
NFNNITAEYS KLQYSNDILS RVEALSAAVE RAEGQTATVT TTSTAYVTIL VTTTATLPIT
TTKEVTMTSP IVVTSPTVVT VPTTVTQTTT ERLVVRETDA ALLAAVAVAA LAVGVLIGRA
KKA
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