| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0395 |
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| Symbol | |
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| ID | 4909791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 377741 |
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| End bp | 378568 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640124148 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001055296 |
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| Protein GI | 126459018 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0722893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCGG CAACCTCCCG CCAAGGCTAC GCGGTATTGG TGGACTTAGA CAAGTGTATT
GGCTGTAGGG CGTGCCAGCT GGCGTGTAAA GACTGGAACG GGCTAACTGC CACAAAGACG
GAGTTCAGCC CCACGCTTGC CCAGCCGCCG TCGCTGACTG CGCAAGACTG GAAGGTAGTC
TTCTTCTACG AGGGGGTTGT GCAGAAGGGG TTGAAGACCC CCGCCGGCGA GGTGGTCTTC
TCGCAGGTGG ACATAGCGCC GTTGCCCTAC AACTGTCTCC ACTGTGTCGA CGCTCCTTGT
GCCAGGGCGT GTCCCGCAGG TGCCATTGTG ACTACGCCAG AGGGAGCAGT GGTGATAAAC
AAGGACTTGT GCATCGGATG CGGCTATTGT GAAAATGCGT GTCCCTTCAA CGTCCCCAAG
AAGGGGCAGG ACGGGAAGTA CTACAAGTGC ACCTTCTGCG TAGACAGAAT TCAAAACGGC
CGTGCCCCCG CCTGCGTCGA GGTCTGCCCC ACCGGCGTCT TCACCTTTGG GCCCATAGAA
GAGGTAACAA AGGCGGCGAG AGAGGAGCAG TCCAAGGGGA GGGTCGTGTA CGGCCTCGAC
TTAGACCCCT ACGTGGGCGG CCAAGTGAGG TGGGTATTCG TGGCGTCTAG GAGGAGCTTT
GCAGTGGAGC AACACTTCCC CAAGGCCTCC ACCGTGGTGT CGAATTCCAT AAGGGAGTAC
CTGAGGCAGG CTGCTACCTA TTTGGCGCCG GCGGCGGCCT TGGGGCTGAC AATCCTCGGC
CTAGCGGCTT GGCGCCAGTC TAGAGTGGAG AAGAAGCACG AAAGATAA
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| Protein sequence | MSPATSRQGY AVLVDLDKCI GCRACQLACK DWNGLTATKT EFSPTLAQPP SLTAQDWKVV
FFYEGVVQKG LKTPAGEVVF SQVDIAPLPY NCLHCVDAPC ARACPAGAIV TTPEGAVVIN
KDLCIGCGYC ENACPFNVPK KGQDGKYYKC TFCVDRIQNG RAPACVEVCP TGVFTFGPIE
EVTKAAREEQ SKGRVVYGLD LDPYVGGQVR WVFVASRRSF AVEQHFPKAS TVVSNSIREY
LRQAATYLAP AAALGLTILG LAAWRQSRVE KKHER
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