Gene Pcal_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0394 
Symbol 
ID4910070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp376991 
End bp377710 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content50% 
IMG OID640124147 
Productformate dehydrogenase gamma subunit 
Protein accessionYP_001055295 
Protein GI126459017 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.041193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGTG TAAAATATGA AGAAGTAGAG ATTGCCTCTA TAGGTTATAA AATAGCTCAC 
AGTTTAAATC TTGTATTATT TACATTGTTA GCTATCACTG GAGTATTGTT GCTCTTTCCG 
GGGCTGTTTA ACTGGTTGGC CTACGCCGTT GGGGCGCCGC TGGCCGCCGC CGTCGGCCTG 
CCTGCCACCT CTGTGGGCCT TGAGCTAGGC CGCACAAGCC ACAGATTTCT CGGTATGCTG 
TGGGGCCTCT TCCTCATCGT CTATGGCATA TACCTAGTGA TGTTTAACAG AGTGCGGATT 
TTTGACGCGT TGAGGAAGCC CATTAGTCAC CAGATTAGAG AGGCCTCAGC CCTTACTAAG 
CACTATCTCT TGGGCAAGCC GCTCCCAGAA GATGTGGCAA AGAACTTGGA AAGACACAAC 
GTCCTTGTAG CTTACATGAC CATACTCCTA TTCATCGGAG TTGTCCTCCT CTCGGCGAGC 
GGGGTGTTAA TGGTCTATAG AGACGTGCTT GGCCTCTCGT TAAACGACTT TAGGCTTCTC 
CTACTCATGC ACGACTTGGG CTTCTACCTC TCGCTGATAT TCGTCCTCTT GCACCTCTTT 
GCCTCTCTGC ACCCCTCCAA TAGGCCTCTA CTAGTGGCTA TGTTTGGATA TGGCAAAGTG 
TCGCTTGAGT GGGTGCAGAA ACACATGCCG AGGTTTTTAA GCCGTGTCCA AAGAGGTTGA
 
Protein sequence
MSSVKYEEVE IASIGYKIAH SLNLVLFTLL AITGVLLLFP GLFNWLAYAV GAPLAAAVGL 
PATSVGLELG RTSHRFLGML WGLFLIVYGI YLVMFNRVRI FDALRKPISH QIREASALTK 
HYLLGKPLPE DVAKNLERHN VLVAYMTILL FIGVVLLSAS GVLMVYRDVL GLSLNDFRLL 
LLMHDLGFYL SLIFVLLHLF ASLHPSNRPL LVAMFGYGKV SLEWVQKHMP RFLSRVQRG