Gene Pcal_0351 details

Gene Information

• Locus tag: Pcal_0351
• ID: 4908372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 336866
• End bp: 337516
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640124103
• Product: hypothetical protein
• Protein accession: YP_001055252
• Protein GI: 126458974
• COG category: [S] Function unknown
• COG ID: [COG1590] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCGTAG TAGACGCGGC TGCTTTTGAG GCGAGGAAGA GGGCCTTTGT GGAAAGGCTC 
GAGAGAGAGG CTCTGCAGGG GAGAGTAGAC GAGGACATCC TCCCCCTCCT CCGCCTCTTG 
AACACACACC CCCGCATCTA CACCACCTCC TCGTGTAGCG GGAGGATTAT GGTGGCGGAG 
GCGGTTAGGC CGAGCTTCAG CAAGGGGAGG GGGTTTAGGC CTGTGGCCAA GTGGCACCAC 
CCAGTGCCGC CCGACCTGGT GAGAGAGGTG GTGTCCAACG TGGAATACGC CTGGCTAATG 
GTTAGGGGGG CCATCCTCCA CGTGGCAGCC GCCGATGCGA AGACTGCCTA CAAGCTCGTG 
GAGATTGGGC GAGAGACTGG CCACAAACAC AGCGGTATCA TAGCCATGAA CAGGGCCGGC 
ATATTCGTGG AGATACTGGG CGAGGAGCGG CTCGACATAC CCATCAAACG TGGCTCCCCC 
ATAGCGGACA TAGACGCGGC AATGGACCTC GCCAATAAGA CCCTCATATT GGCCAAGCTG 
AGGCTCTACT GGCTCGCGGC TAGGCTTGAG GCAGAGCTAT TCGGCGTCGA GGCTCCCACA 
AGCGAGGAGA TAAGAAGAGC GATTAGAAGG GTTGCCCAAT GCCTCGGCTA G 

 

Protein sequence

MPVVDAAAFE ARKRAFVERL EREALQGRVD EDILPLLRLL NTHPRIYTTS SCSGRIMVAE 
AVRPSFSKGR GFRPVAKWHH PVPPDLVREV VSNVEYAWLM VRGAILHVAA ADAKTAYKLV 
EIGRETGHKH SGIIAMNRAG IFVEILGEER LDIPIKRGSP IADIDAAMDL ANKTLILAKL 
RLYWLAARLE AELFGVEAPT SEEIRRAIRR VAQCLG