Gene Pcal_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0349 
Symbol 
ID4908814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp334853 
End bp335770 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content52% 
IMG OID640124101 
Producthypothetical protein 
Protein accessionYP_001055250 
Protein GI126458972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTGGA TAATCCCCGC GTTGGTAATA GCCGCCGCGG CTCTGGCGGC AAATGTCACA 
TACGTGGTGA CGCCGTCTGG CAATATACAC ATAACGTATC AAGACAATGG GACCTTCATA
GTAATAAACT TCAATAACAA TAAGACGCTC ACCATAAACG CGAAGCTGAA TATCACTAAC
GCCACAGATC TCTACTACAT ACACGTGGTG GGCAAGGCCG TGGGCGTCTA CAACTCCACA
GCGGTAAAAG CCCTCCTCTC CACTCTGCAG AACGCCACTC GGGCACAGGC GCTTGAGACG
CTACGCCAGC TGGCCTACAC CCTGGCCGCG AGTAACTCCA CGAGGGAGCT CAAGGTCAAG
GCCTTTATAA CTGCGAGGAG CCTCAACGCC ACTTACAACG CCACGTGGCT CCGCATGAAG
GTAGAGTACG AGTTTGAGAA AAAGCTGGGC AAGCTCAACG GCACGAGAGT TACCACAGAA
AACGAGCTAG AGATTAAGGG CTATGCCGCA AACGCGCAGA AACTCGCCGA GGTTCTCAGG
GCGCTGGCTA GGCAACTGGC CCCCGTGGAC AACGCCACAG CCTCGGCGCT CCTCCAGATA
AGCAACAGAA TAAACGGCAC GGCCATCAGC CTAAAGACGG TGCAAAACGG CACAGAGATA
AAGGTCGTCT ACAAGAACGG GAAATTCGAA ATTGAGATAG AGAGAGGCAG AGATAAGAAG
CACGAGGAGA GAGACGCCGC TGGCGGCAAG CAAGAGGAGA AAAAGGAGGA GAACGGAAAA
GAAGAGTCAA AACAAGGCAA CAAATCAAAT GACGACGATA GCAAGGAGAA AAAGGATAGC
GGAGAGTCAA AGAAAGACGA CAAGAAGTCA GACGAGGGAG GAGGAGAGAA GGAAAAGAGC
GAGAAGAAAA AGCGCTAA
 
Protein sequence
MRWIIPALVI AAAALAANVT YVVTPSGNIH ITYQDNGTFI VINFNNNKTL TINAKLNITN 
ATDLYYIHVV GKAVGVYNST AVKALLSTLQ NATRAQALET LRQLAYTLAA SNSTRELKVK
AFITARSLNA TYNATWLRMK VEYEFEKKLG KLNGTRVTTE NELEIKGYAA NAQKLAEVLR
ALARQLAPVD NATASALLQI SNRINGTAIS LKTVQNGTEI KVVYKNGKFE IEIERGRDKK
HEERDAAGGK QEEKKEENGK EESKQGNKSN DDDSKEKKDS GESKKDDKKS DEGGGEKEKS
EKKKR