Gene Pcal_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0313 
Symbol 
ID4908208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp301436 
End bp303865 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content58% 
IMG OID640124063 
Productphosphoenolpyruvate synthase 
Protein accessionYP_001055214 
Protein GI126458936 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 
TIGRFAM ID[TIGR01418] phosphoenolpyruvate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTTA TCAAGTGGAT AACCGAGGTG GGAAAAAACG ACGCCCTTTT GGTGGGCGGC 
AAGGGGGCTA ACCTCGGCGA GGTGGCTAAG CTGGCGACAG TGCCCCCTGG CTTCATCGTC
ACGTCTGAGG CCTTTAGGTA TTTTCAGCAG TCGGTAGGAC TCGCCGAGAG GATAAGGGAG
GTTCTCAACG CCTACATCAG GTCCGGTGAG CCTGAGGAGT ATGAGAAGGC TAGCGCCGAA
ATTAGGAGGA TGGTTGAGGA GGCCCCCCTC CCGCCTGAGC TAGAGAGGGC AATTGTAGAG
GCGTATATGA GGCTCGGCGA GGAGGTGGGA ATTAAAGACG TGGCGGTGGC CGTGAGGAGC
TCAGCCACTG CTGAGGACAT ACCCGAGGCC TCTTTTGCGG GGCAACAGGA CACCTACCTC
AACGTGAGGG GGGCGGAGAA GGTGGTGTAC TATGTGAAAA AGGTGTGGAG CTCTCTCTAC
ACTGCCAGGG CCCTCTACTA CCGCGACAAA ATGGGTATAC CTCACGAGAA GAGCCTAATG
GCAGTGGTGG TACAGAAACT GGTCAACGCA CGCTCCGCGG GGGTCATTTT CACCCTTGAT
CCAACGAACG GCGACACGTC CAAGGTAGTG ATTGAGGCCA GCTGGGGCCT CGGAGAGAGT
GTGGCGAGGG GGCTCGTTAC TCCCGACGAG TACGTGGTAG ATAAGGCCAC GTTTAAGATC
GTAGAAAAGA GGATATCCCC CAAGAAGGTG GCTGTGGTGA GAGATGAGGC TGGGCTGACC
AAGGAGGTGG AGCTCCCGCC TGAGAAGGCA AATGCCCCTG CCCTCAGCGA CGAGGAGGCG
GTGGAGTTGG CCAAAATGGC TGTGAAGTTG GAGCAACACT ACGGTCACGC CCTCGACATA
GAATTCGCCG TAGACGCCGA CTTGCCGTTC CCGAGGAATT TGTTCATTCT CCAGGCGAGG
CCCGAGACTG TATGGTCTAG GAAGGCCGAG CGGCCTAAGG CCTCCGTGGT GCCGGCAGGG
ACCGTCGTAG TGAAGGGCAT ACCCGCCAGC CCTGGCGTGG CTGTGGGAAC TGCCAAGGTT
TGTCTCACCT TGGAAGACGC CAAGAAGAAG CTGAAGAAGG GGGACATCCT CGTGACTAAG
ATGACGGACC CAGACTGGGT TCCCTACATG AAGCTTGCCG CCGCTATTGT GACCGACGAG
GGTGGGAGGA CGTCGCACGC CGCGATTGTC AGCAGAGAGT TGGGCATACC CGCCGTGGTT
GGAACTGGCA ACGCGACGTC CGTGCTTAAG GATGGAGAGG TCTACACCGT GGATGGGAGC
AGGGGCGTAG TTTTGGCAGG CGCGGTGGCG GCTAAGGCTG AGGAGGCGAA GGCGCCTGCG
GCGGCTGTGG CGCCTCCCAG GGAGATAATA CTGCACATAT ACCGCGCCGT GCCCACGGGG
ACTAAGGTGT ATATGAACCT CGGCGAGCCT GAGAAGATTG ACGAGTATAA GGACTTGCCG
TTTGACGGCA TTGGCCTCAT GCGCATAGAG TTTGTGATCT CGAGCTGGGT GGGCCAGCAC
CCGCTCTACC TTCTCTCAAT TGGGCAAGAG CAGAAGTTCG TGGACAAGAT GGCTGAGGGC
ATAGCCAAGG TGGCCTCGGC CATATACCCG CGCCCCGTGG TGGTGAGGTT CAGCGACTTT
AAGTCGAACG AGTACAGGGG CCTCGAGGGG GGCGAGAAGT TTGAGCCTGA GGAGAGGAAC
CCCATGTTGG GCTGGAGGGG TGTCTCTCGC TACGTGTCGC CGCAGTATGA GAAGGCGTTT
AGGCTGGAGC TCAGGGCTAT AAAGAAGGTG AGGGATGAGA TGGGGCTTAA CAACGTGTGG
GTCATGGCGC CGTTTGTGAG AACTGTGTGG GAGGCGGAGC GGTTTAGCCG CCTCTTGGAG
GAGGAGGGCC TCTACAGAGA TAGAGACTTC AAGGTGTGGG CCATGGCCGA GGTGCCCTCA
ATCGCCTTTA TGGTGGAAGA GTTTGCCGAG TACTTCGACG GATTCTCGGT GGGATCCAAC
GACTTGACTC AGCTAGTGCT AGGCGTGGAT AGGGATAACG ACTTCTTGGT GAGGATTAAC
CCGAGGTACT TCGACGAGAG GGAGGCCCCC GTGCTTAAGG CCATATACGA GCTCATTAGG
AGGGCCCACA GGGTGGGGAG GACTGTGTCC ATCTGCGGGC AAGGCCCCTC GGTGTATCCG
CAACTGGTGG AGTTCCTAGT GAGGGCTGGC ATTGACAGTA TCTCGGTGAA CCCAGACGCG
GTGCTTCAGA CGAGAGTGCT TGTGGCCTCT GTGGAACTTA AAGTGCTCAG GGAGCGCCTA
GACGCCATCT ACAGTGCCTT GTACAAGAGG GACAGCGACG AGGAATTTGC AGAAATAGTG
AAGAAGGTCT TCGGCGGCGT CAAATACTAG
 
Protein sequence
MPFIKWITEV GKNDALLVGG KGANLGEVAK LATVPPGFIV TSEAFRYFQQ SVGLAERIRE 
VLNAYIRSGE PEEYEKASAE IRRMVEEAPL PPELERAIVE AYMRLGEEVG IKDVAVAVRS
SATAEDIPEA SFAGQQDTYL NVRGAEKVVY YVKKVWSSLY TARALYYRDK MGIPHEKSLM
AVVVQKLVNA RSAGVIFTLD PTNGDTSKVV IEASWGLGES VARGLVTPDE YVVDKATFKI
VEKRISPKKV AVVRDEAGLT KEVELPPEKA NAPALSDEEA VELAKMAVKL EQHYGHALDI
EFAVDADLPF PRNLFILQAR PETVWSRKAE RPKASVVPAG TVVVKGIPAS PGVAVGTAKV
CLTLEDAKKK LKKGDILVTK MTDPDWVPYM KLAAAIVTDE GGRTSHAAIV SRELGIPAVV
GTGNATSVLK DGEVYTVDGS RGVVLAGAVA AKAEEAKAPA AAVAPPREII LHIYRAVPTG
TKVYMNLGEP EKIDEYKDLP FDGIGLMRIE FVISSWVGQH PLYLLSIGQE QKFVDKMAEG
IAKVASAIYP RPVVVRFSDF KSNEYRGLEG GEKFEPEERN PMLGWRGVSR YVSPQYEKAF
RLELRAIKKV RDEMGLNNVW VMAPFVRTVW EAERFSRLLE EEGLYRDRDF KVWAMAEVPS
IAFMVEEFAE YFDGFSVGSN DLTQLVLGVD RDNDFLVRIN PRYFDEREAP VLKAIYELIR
RAHRVGRTVS ICGQGPSVYP QLVEFLVRAG IDSISVNPDA VLQTRVLVAS VELKVLRERL
DAIYSALYKR DSDEEFAEIV KKVFGGVKY