Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0298 |
Symbol | |
ID | 4909255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 290101 |
End bp | 291255 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640124049 |
Product | hypothetical protein |
Protein accession | YP_001055200 |
Protein GI | 126458922 |
COG category | [S] Function unknown |
COG ID | [COG3372] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTGA TGTCCATAGA CTACCTCCGC GTCGTGCGGA AGGGCGGAGA GATTAGGCCG AGGTATCTCT CCGACGCGTC GGCGGCGGCT GAAGTCATTG AGGCGGCGAG AGGTGCCAAG ACGCTGGGCG AGTTCAAGAG GAGGGTGGAG GCGCTTGGCT TTGACAAAAA GCTGGCGGGC GGCCTCGCCC ACGTCCTCAG CCACTTCCTC AAGGCTGAGT CAGTGGACAG GCGCCTGGTC TCCAGGATCA GGCTTGAGGT CTTTAAAGCC GCGGCGGCAT CCTGGCCCGT CTTAACAGCT GAGGCGAGGG AGGCTGTCTT CAACACGGTG GCGTCCAAGC TCAGGCTAGA CCCCGGGGAG GTGAGGTGCC TCTTCTTAAA GGCCTACGAG GACAACTTAG AGATCGTCGA GCCCCCCTCC ATTACGGCGG AGGAGCTGGC GCGGGAGTAC AACCTCGCGC TTATGCAGAC GCTCTTGTTC AAGTCGTTAT ACGTAAAGGC GTGGGTCCCC AACGCCCCCG CGGTGGTGAA GAGGCTGATA AGGGCGGTGA AGGGGTACCG CCTAATGTAC ATAGCCGAGG AGGGGGACGG GGGGTGGCTC GTGTTCCACT TCGACGGCCC AGTCTCCGCG CTTAGGCAGA CCGAGCGGTA CGGCACTAGG CTCGCCAAGC TCGTGCCCTA CATAGTCTCC GCCGGACAGT GGAAAATAGA GGCACAGATA AAGCTGAGGG ACAGAGTGTA CACATACCGC GAGGACTGGC GCACGGCCCC CGACCTGCCG CGCCAGCCTC CGCCGGAGGA GGAGTTCGAC AGCTCTATAG AGGCGGAGTT CTACAGGCAA GTGTCTAGGG TCTGCCGCGT GGAGCGAGAG CCCGAGGTCC TCGTAGTGGA CAAGAGAGTG TACATACCGG ACTTCAAGAT AGGCGATTTG TACGTCGAGG TGGTGGGCTT CTGGACGCCG GACTACCTCA GGCGGAAGTA TGAAAAGCTG GCTAAGGTGA AGAAGCCCCT CCTAGTCCTT GTGAGCGAGG AGCTCGCCAT GGCCACGTGG AAGGAACTGC TCCCAAACGT GGTGTTGTTC AAGGACAGGC CTAGGCTCAG CGACGTGTAC AAACACATAA AGCCCTACTG CACGCCGCCG GGGAGACAGC CCTAG
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Protein sequence | MTLMSIDYLR VVRKGGEIRP RYLSDASAAA EVIEAARGAK TLGEFKRRVE ALGFDKKLAG GLAHVLSHFL KAESVDRRLV SRIRLEVFKA AAASWPVLTA EAREAVFNTV ASKLRLDPGE VRCLFLKAYE DNLEIVEPPS ITAEELAREY NLALMQTLLF KSLYVKAWVP NAPAVVKRLI RAVKGYRLMY IAEEGDGGWL VFHFDGPVSA LRQTERYGTR LAKLVPYIVS AGQWKIEAQI KLRDRVYTYR EDWRTAPDLP RQPPPEEEFD SSIEAEFYRQ VSRVCRVERE PEVLVVDKRV YIPDFKIGDL YVEVVGFWTP DYLRRKYEKL AKVKKPLLVL VSEELAMATW KELLPNVVLF KDRPRLSDVY KHIKPYCTPP GRQP
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