Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0297 |
Symbol | |
ID | 4909106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 289013 |
End bp | 290104 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640124048 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001055199 |
Protein GI | 126458921 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTTTTT GCAAACTCTG TGGAAGAGTT GGTATCACAA TTTCTAGCAG GCTGGGGGTC TGTGTAGACT GCCTTAGGAG GAGGCCGAGG GAGGCGTTGA AGATCGCCGA AGAGCTCCAT AGGGCTAGCC GCCTGAGGTT TGGCCTCCCC CTCTCTCCTC CCCAGGGCGG CGTCCCCTGC GGCATATGTG GCAGGGGGTG CTCGGTGCCC GAGGGCGGCG TGGGATACTG CGGCCTTGTT AAAAACGTGG GTGGGCGCTT GACTAGGCCA GGCGGCGTGT ACATGGGGGT TCTTGAGTAC TACTACGACC CAATACCCAC CAACTGCGTC GCCGACTGGG TGTGCCCAGC GTCAACGGGG AGGGGGTACC CCAAATACGC CAAGTCGCCC GCGGGCGAAG TTGGCTACTA CAACTTGGCC GTCTTCTACG GCGCCTGTAG CCTCGACTGT CTGTACTGCC AGAACTGGCA CTATAGGAAG TACCCGAGGC GCCCCGTGTT TGCCTCGGTG GAGGAGCTGG ATAGGGCCAT GGACCGCCGC GTGTCTTGCG TCTGCTTCTT CGGCGGCGAC CCCGCGCCGC AGGTGGTACA CGCCCTACTT GTGGCAAAGA GGGCGGCGGA GAAGGGGGTC AGAGTGTGTT GGGAGACGAG CGGCCAACTG GCGCCGCACC TCTTGGACAA GGTGGTGGAG ATCTCGCTTA AGACTGGGGG AATTGTGAAA TTTGACCTCA AGGCCTTTAC GCCGAGCGTC TACAAGGCGC TGACCGACGG CGAGGTGGAC ATAGTGCTTA GAAACTTCAA AGTGGCGGTG CGCCGTTTTA GAGAGCGGCC GGAGGTCCCC CTGGTCGTGG CCTCGATCCT CCTAGTGCCC GGCTACGTCG ACGAGATAGA GGTAGACCTC CTCACCAAGT TTATAGCACG CCTAGAGCCA GAGGTGCCCA CTAGATTTTT GGCATTCCAC CCCGACTACC TCCTCGACGA TCTGCCCCCG ACCTCCATTC GCCATGCGGA GACAGCCGTA AAAATCGCAC AGGAAAACGG CCTCGTAGAG GTGGACGTCG GCAACGCGTG GCTACTCGGC GACTACTACT AG
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Protein sequence | MGFCKLCGRV GITISSRLGV CVDCLRRRPR EALKIAEELH RASRLRFGLP LSPPQGGVPC GICGRGCSVP EGGVGYCGLV KNVGGRLTRP GGVYMGVLEY YYDPIPTNCV ADWVCPASTG RGYPKYAKSP AGEVGYYNLA VFYGACSLDC LYCQNWHYRK YPRRPVFASV EELDRAMDRR VSCVCFFGGD PAPQVVHALL VAKRAAEKGV RVCWETSGQL APHLLDKVVE ISLKTGGIVK FDLKAFTPSV YKALTDGEVD IVLRNFKVAV RRFRERPEVP LVVASILLVP GYVDEIEVDL LTKFIARLEP EVPTRFLAFH PDYLLDDLPP TSIRHAETAV KIAQENGLVE VDVGNAWLLG DYY
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