Gene Pcal_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0296 
Symbol 
ID4909931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp288657 
End bp288983 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content53% 
IMG OID640124047 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001055198 
Protein GI126458920 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGG AACTGTTGAA ATACCAAAGG GTATTAATAG ACCAAGACAC TTGCATCAGT 
TGCGGCGCCT GTGTCGCCGC ATGCCCCTAC CAAGCGCTTG AGCTGGACGA AAACGGTAAG
GCTAGAATGA TCTGGGAGAT GTGTAAAGAC GACTTCTCCT GCGTCGCTGT ATGTCCCGTC
AAATGTATAT ACAAGATAAG CGAGGCACCT GCCGAGTTTA AGGCTAAGAA GGGGTGGTAC
AGGCTGGGCA AGGCGCTGTC GCCAGAGGAG CAGAAGGCTT TTCAGGAGTG GAAGGCGAAA
TACGGCGTCA CAGCAGACCC AGTATAA
 
Protein sequence
MAAELLKYQR VLIDQDTCIS CGACVAACPY QALELDENGK ARMIWEMCKD DFSCVAVCPV 
KCIYKISEAP AEFKAKKGWY RLGKALSPEE QKAFQEWKAK YGVTADPV