| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0295 |
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| Symbol | |
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| ID | 4909750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 288060 |
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| End bp | 288563 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124046 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_001055197 |
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| Protein GI | 126458919 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGTTAC GGCTCACAAT CTCTTTCAAG TATGGAGACG GGTCTGTATG CGGCGAAGTA
GTTGGGGTAA ACATGGGCCA CGTGCTTCTC GCAGATCAGT CTTTGACGAG GGTGAAGTGC
GAGCCTTGCG AAGTAGTGGC TGAGTACGGC GCCGCGGTGG TTGGGGGCAG AATATGCGGA
GGCAGAGCCG AGCTCATCCT CATCGCAAAC GCCTACCAAA TCTCCCGGAT TTTAAGGGAG
TTGCACTACC GGGGGCTACA GCCGAGGGTC ATCGGCAGGG CTAAGTACAT CAGAGACCCA
CAGCTCACGG AGGACCAGCT CAAGCTCGTG GAATTGGCCT ACCGCCTCGG CTACTTCGAC
GATGGGAGAA AGATCTCTCT CAAGGAGCTC GCCGCCGTCG CCGGCATATC GCCCTCGGCG
GCGGATAGGA AGCTTAGGCG GGCGCTGAGG AAAATTGTGG AATTCTACTT GAGCAGGTTT
GGCAGAGGCG ACCTCGGCGG CTAG
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| Protein sequence | MALRLTISFK YGDGSVCGEV VGVNMGHVLL ADQSLTRVKC EPCEVVAEYG AAVVGGRICG
GRAELILIAN AYQISRILRE LHYRGLQPRV IGRAKYIRDP QLTEDQLKLV ELAYRLGYFD
DGRKISLKEL AAVAGISPSA ADRKLRRALR KIVEFYLSRF GRGDLGG
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