Gene Pcal_0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0281 
Symbol 
ID4908184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp278253 
End bp278681 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID640124033 
Producthypothetical protein 
Protein accessionYP_001055184 
Protein GI126458906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGGG TTTTAACCGT GTCCTTCATC GCGCCTATGT ACCTCTACTT GGGCGTCGTC 
GTGGTGAGGG GTCTGCGTGG GTATATGTGG CTTCTCGGCC GCCGGCTCTA CTTCAAGACG
TCGTGGAGGG CCCGCGACAC CCACTACCTA GGCCGACTTG AGGACCTTCT GTCGGCGTCG
GCGAGGCTTA GGCGCCTGAT ACCAAGGCCG GTGGACGTTA GGACAGTCGT CGTTGCCGTC
GCCAAGGCGT TGGCCATGGC CCACTACCTC GCGAAGAGGT GCAGGGGCTC GCCCACGTGG
CGATACCTCC CATTTGAGGT GGAGATGGCC ATTGAAGAAG CGGCGCGGTT ATTAACGGCC
AGGTGGCCAA GCGCGGCGAA GTACTTTGGG GGGTCGCGTT GGGGCAGTTC GGCGACGTGG
TTGACGTAG
 
Protein sequence
MGRVLTVSFI APMYLYLGVV VVRGLRGYMW LLGRRLYFKT SWRARDTHYL GRLEDLLSAS 
ARLRRLIPRP VDVRTVVVAV AKALAMAHYL AKRCRGSPTW RYLPFEVEMA IEEAARLLTA
RWPSAAKYFG GSRWGSSATW LT