| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0276 |
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| Symbol | |
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| ID | 4908848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 272735 |
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| End bp | 273529 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640124028 |
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| Product | CRISPR-associated RAMP Cmr6 family protein |
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| Protein accession | YP_001055179 |
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| Protein GI | 126458901 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1604] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01898] CRISPR-associated RAMP protein, Cmr6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTGA GGGGGAGGAG GGAGTTTGCG GGGGGAGACG ACCCGCTGAG CCGCTACTGC
CAAGAGGACT ACAACGTCGT CTCTTGCATA AACCTCGCCT TCCTCGAGTG GATGCGGCAG
AAAATCGGAA AGCCCGAGGG GGCACGGCAG AGGAGCGAGG GGCTACCTGA CTTCTCCCGC
AGGGCCGTCT TGCACCTCTA CAGACAGCCG CCGAGGGCCG CCCGCGAGGA GGTGGAGCGC
TACGTACAAG CGATCTTCGA CGCCGTCTCC CGCGCCTCTG CGATGGCGTT TAAGTACGAG
TTCACCCTGG AGACCCCCCT CACAATACAC ACGAAGTGGC CCTACCTCCC CCTAGAGATA
GGCCTGGCGT GGCACCCAAT ACTCAACGTC CCCTACATCC CCGCCAGCTC CCTCAAAGGC
GCGGCCAGGG CCGCCGCCGT CAGCCCGCTG TGCGGCATAG AGCCAGAGGA CCTGTTCGGA
ACGACGGAGG AGGAGGGCGA CCTAATATTC ACAGACGCCT ATCCCACGAG GTGGGAGAGG
CTGGTGGAGC CCGACGTAAT TACGCCCCAC TACAGAGAGA CCGCCGGCGA AATCTCTGAA
GCCCAAGCGA GGCCGGTCCC CCTAGTCTTC CCCGTGGTCC CAGCCGGCAC CACCTTCACC
TTCGTAGTCG CCTTTAGGCA GATGGTGGGC CAGGAGTGCT GGGGCGAGAC TCTGCGGTGG
TTGCAACAGG TGTTGACAAG GGGCCTGGGG GCAAAGACGC AGCTGAGCTA CGGCGTCTTC
AGAAGACAGA CATGA
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| Protein sequence | MAVRGRREFA GGDDPLSRYC QEDYNVVSCI NLAFLEWMRQ KIGKPEGARQ RSEGLPDFSR
RAVLHLYRQP PRAAREEVER YVQAIFDAVS RASAMAFKYE FTLETPLTIH TKWPYLPLEI
GLAWHPILNV PYIPASSLKG AARAAAVSPL CGIEPEDLFG TTEEEGDLIF TDAYPTRWER
LVEPDVITPH YRETAGEISE AQARPVPLVF PVVPAGTTFT FVVAFRQMVG QECWGETLRW
LQQVLTRGLG AKTQLSYGVF RRQT
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