Gene Pcal_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0237 
Symbol 
ID4908544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp235661 
End bp236101 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content63% 
IMG OID640123989 
ProductNUDIX hydrolase 
Protein accessionYP_001055140 
Protein GI126458862 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.135862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGACG AGGTGTCTGC AGGCGCCGTG GTCTACTACG GGGATGGGGG CGGAGCGGAG 
TACCTCCTCT TGCACTACCC CGCGGGCCAC TGGGACTTCC CCAAGGGCAA CGTCGAGCCC
GGCGAGACGC CCGAGGCGGC CGCGCTGAGG GAGGTAAAGG AGGAGACGGG CCTCGACGTG
GAGTTGGTAG AGGGCTTCCG GGAGGAGGTG GAGTACGTGT ACTACCGGGG CGGCAGGAGG
GTGCGCAAGA AGGTGATCTT TTTCCTCGCC AAGGCGCATA CGAAGGAGGT GAAGTTGAGC
TGGGAGCACG TGGGCTACGC CTGGCTCCCC TTTGACAAGG CCTTGGCTAG GCTCACCTAC
GACAGCTCGC GCCGTGTGTT AGCTAAGGCC CACAGACACC TCCGCGCTGT GTACAATGTT
TCAAAGCAGA AGGGAGCTTG A
 
Protein sequence
MYDEVSAGAV VYYGDGGGAE YLLLHYPAGH WDFPKGNVEP GETPEAAALR EVKEETGLDV 
ELVEGFREEV EYVYYRGGRR VRKKVIFFLA KAHTKEVKLS WEHVGYAWLP FDKALARLTY
DSSRRVLAKA HRHLRAVYNV SKQKGA