| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0231 |
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| Symbol | |
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| ID | 4909801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 230613 |
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| End bp | 231563 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640123983 |
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| Product | daunorubicin resistance ABC transporter ATPase subunit |
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| Protein accession | YP_001055134 |
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| Protein GI | 126458856 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.158088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAATAA GAGCGGAGGA CTTGAGGAAG AGGTACGGCG ACGTCGTGGC GCTGGACGGA
GTGACTTTCC ACGTGGAAAA AGGCGAGGTC TTCGGCCTCC TCGGGCCAAA CGGCGCTGGG
AAGACTACCA CGATCAAAAT ATTGACCGGC TTAACTAGGC CCACCTCGGG GCGGGCGTGG
GTCGCCGGCT TCGACGTGGT AAAAGAGGCG AGGGAAGTGA AGAAGAGGAT TGGGTGGATT
GCCTCTGAGG TCATTGTAGA CGACGAGCTC ACCGCGTGGG AGAACTTAGA AATACAGGCA
AGGCTCGTCG GGGTAAGGGA CTGGAGGGAG AGGGCTGGGG AGCTCTTGAA GTACTTCGGG
CTGTGGGAGG CGGCGGGGAG GCCCGTGGGG AAGTACTCCA CTGGGATGAG GAAGAGGCTT
GAGGTGGCCA TGGCCCTCCT CCACGGGCCC GAGGTGCTCT TCATGGACGA GCCCACCGTG
GGCCTAGACG TGGGGGCTAG AGTGGGGCTC TGGGAGGTTG TGAAAAGCAT AAACAGAGAC
TTTGGAGTCA CAGTCCTCTT GACCACTCAC TACATGGAGG AGGCGGAGGC CCTCTGCAAC
AGGGTGGCGA TAATAAACAG GGGGAGAATT GTGGCAGTGG GGACGCCGGA TGAGCTCAAG
GCCAAGTACG GCGTCGACGT AATTGAGCTA GAGGTGTCGG GGAGACCCGA CGTCGCCTCT
CTGTCCAAAT TCGGTGAAGT TGTTGCGGTG GATGGGAGAA TCGTCATAAA GACGCGGGGC
GCCGAGGAGG TGCTCCCCGA GGTCGTTAAA GCGGTAGAGG GCGTCAAAAG CGTCAAGGTG
AAGAAGGCCA GTCTTGATAC AGTGTTCATA AATCTCACAG GCGCCTCCAT CGAGGGGGAG
CAGACGGACA TCCGTCAGTT GTACATGAGG ATAAGGCGGG CGAGGAGATG A
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| Protein sequence | MAIRAEDLRK RYGDVVALDG VTFHVEKGEV FGLLGPNGAG KTTTIKILTG LTRPTSGRAW
VAGFDVVKEA REVKKRIGWI ASEVIVDDEL TAWENLEIQA RLVGVRDWRE RAGELLKYFG
LWEAAGRPVG KYSTGMRKRL EVAMALLHGP EVLFMDEPTV GLDVGARVGL WEVVKSINRD
FGVTVLLTTH YMEEAEALCN RVAIINRGRI VAVGTPDELK AKYGVDVIEL EVSGRPDVAS
LSKFGEVVAV DGRIVIKTRG AEEVLPEVVK AVEGVKSVKV KKASLDTVFI NLTGASIEGE
QTDIRQLYMR IRRARR
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