| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0230 |
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| Symbol | |
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| ID | 4909353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 229846 |
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| End bp | 230616 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640123982 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001055133 |
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| Protein GI | 126458855 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.214662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGGG AGGTATACGC CTTGTACAAG AGGGAGGTGC TTAAGCTCGT CAGAAGCAGA
TACATGTGGA TAATGATAGT GGCACAGCCC CTCATGTGGA TTCTCTTCTT CGGCAACAGC
CTCGCGGGCA TGCCCAGCGC ATTCCTCAGG CAGTACTTCG GCGTAGACAA CTACCTGGCC
TACATGTTGC CCGGCATGAT CTCCATCTTG ATGATGAGCA CGGGGATGTT CGCCTCGATG
AGCCTCGTGT TCGACAAGCG GGTGGGCTAC CTAAAGAGAA TACTCGTAAC CCCTACTCCA
AAGGCTGCAA TCCACTTGGC AAAGGCGCTT GGCGCCGTTA CAAGAGGCCT ACTGGCCGCC
CCTGTGATAC TCCTCCTCGG CGCAGTGCTG GGGGTCCAGT ACACGGTAAA CGCCATTGCC
CTAGCCGAGT GGCTAGTGGC GCTTGTGGCC GCCGGCGTGG GGTTCGCCTC CCTCTTCACA
GCACTAACCG CGAACACCGC AGATGTACAA GCCCCAGGCG TCGTCATGAA CTTCATAACC
ATGCCGCTAA TGTTCACATC CACAGCCCTA TTCCCAAGAC AGTTCTTCCC CACTTGGCTA
CAGGCAATAA GCGACGCCAA CCCCCTCACC TACCTCACAG AAATTGGACG AAGCGCACTC
GTCTACGGCG CCGTCCCACC CCCCAGCCAC TTTGCAGCCG TGCTCATCTT TGCGGCGACC
GCAACGGCCC TGGGGGCGAT AGTCGTTGAG AAGACCCTCA CCGCCGACTA G
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| Protein sequence | MIGEVYALYK REVLKLVRSR YMWIMIVAQP LMWILFFGNS LAGMPSAFLR QYFGVDNYLA
YMLPGMISIL MMSTGMFASM SLVFDKRVGY LKRILVTPTP KAAIHLAKAL GAVTRGLLAA
PVILLLGAVL GVQYTVNAIA LAEWLVALVA AGVGFASLFT ALTANTADVQ APGVVMNFIT
MPLMFTSTAL FPRQFFPTWL QAISDANPLT YLTEIGRSAL VYGAVPPPSH FAAVLIFAAT
ATALGAIVVE KTLTAD
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