| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0226 |
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| Symbol | |
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| ID | 4908548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 227352 |
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| End bp | 228272 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640123978 |
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| Product | hypothetical protein |
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| Protein accession | YP_001055129 |
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| Protein GI | 126458851 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0625321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATCG CCTTGGGCAC CCCCCTCAGC GCTGTGCCAA AGCCCTGGCT ATACTTCGAC
GTCCCAGCCC TAATTATCAA CGCGCTGGAG GCCAAGAGGC GCAACCCCCG CCTAGCGCTG
GGGTACGAGG GAGAGCTCTG GCTAGACTCC GGGGGCTTCC AAGTGCTGAG AAAGGGCCTT
CAACTCGCCG TGGAGGAGGT GGCCGAGGTG TATAGGCAGG TGGAGGCCCA GTACTACCTC
TCTCTAGACG TCCCGCCCTC CCCCACCGAC CCGCCAGACG TGGCGGAGAA GAAGTTTGAG
AAGACTTACC GAAACTGGGT GCGGCTCTCG AGGGCTGTGG AGGGGGTTGT TCCAGTGCTC
CACGTCTACC GCGACGAGGG GCTCTTCCTC AAGTACCTGA GGCGGTACCT AGACGCCCCC
GTCTTAGCCA TAGGAGGCGC AGTGCCCTAC GTATTAATCA CGAGGGGGGT GCCGCGGGGG
TCCAGGGAGT ACGCCTTGAG GCTGATAAAA ACGGCGAGAG AGGAGTTCAA GGGCAAGCTC
CACGTCCTTG GGCTGGGCAG CCCCTCAGTC ACGCCGATAC TTGAGGCGCT CGGCGTAGAC
AGCACTGACA CATCCACTTG GCGAGTCAAG GCGGCCTACG GCAAAGTCAT ACTCCCAGGC
GGCGGCGAGA GGCACGTCAC TGGGAGAAAG GTGAACTTCG GCCCGAAGAA GGCCCTCGAA
GAGGAGCTGG AGGAGCTACG CGCCTTCTTG GCCCAGACAG GCTTCCCTGC CCTTACGCCG
GACTTCAGCC AGCGCTTGGC GGAGTCTTTT GAGTACCGGG CCCTCGTCAA TGCGTGGGTG
GTGCTCCACA GCCGCACGGC GCCTAGGTCC CCCGCCTTTA GGAAGCTGTA CGCCGCGCTG
GCGGCGCCGC ATAGCGGCTA A
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| Protein sequence | MKIALGTPLS AVPKPWLYFD VPALIINALE AKRRNPRLAL GYEGELWLDS GGFQVLRKGL
QLAVEEVAEV YRQVEAQYYL SLDVPPSPTD PPDVAEKKFE KTYRNWVRLS RAVEGVVPVL
HVYRDEGLFL KYLRRYLDAP VLAIGGAVPY VLITRGVPRG SREYALRLIK TAREEFKGKL
HVLGLGSPSV TPILEALGVD STDTSTWRVK AAYGKVILPG GGERHVTGRK VNFGPKKALE
EELEELRAFL AQTGFPALTP DFSQRLAESF EYRALVNAWV VLHSRTAPRS PAFRKLYAAL
AAPHSG
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