Gene Pcal_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0217 
Symbol 
ID4909406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp218747 
End bp219328 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content58% 
IMG OID640123969 
Producthypothetical protein 
Protein accessionYP_001055120 
Protein GI126458842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.294168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCAGC AGAAGAAGGA CCGGGTGAAT ATAGCTGTGG CTAAAGATGT CGCAGAGCGC 
CTAGCCGCCG TGGCCGAGTC CCTCGGCATG ACGCAGTACG CCCTGGCGAA CCAGATACTG 
GCCACGGGCC TAGAGCTGGT GCAACAGGGC TTTAAAGTCC AGCAGATTAG AGAAATTGCG 
GAGTTTTACA AGGTCATGGT GGAGCTGGAG GTGGTGCCAG TGCCCGGACG CCTTTTGGAC 
AAAATGGTCG CCGACATGTA CAAAGAGAAC CCTGAGGTAG TGGAAAAGGC GTGGTGTGAG 
GCCGGGAAGA TGTTGGCGAG CTACATAAAG GCCGTATACG GCGGTTTGGA CTCGGCGCTT 
TCCCTAGTCC CCTACTTCTC AAAGGTGATA CCCGCCAAGA GGTTTGACGT AAAGGCCTCT 
GGGGACGAGC TCGTCGTAGA CGCCGTGGGA GTTGGGTACG GGGTAGAGAG CGTGAAGGCC 
ACCGCCGCGG GCGCCCGTTG CTTCTTAGAG GACTTGGGAT ACGAGGTCAA GGAGGTAATC 
ACGGCGCCTG GGATCCTCCG GGTGAGGGCC GTAAAGAAGT AA
 
Protein sequence
MNQQKKDRVN IAVAKDVAER LAAVAESLGM TQYALANQIL ATGLELVQQG FKVQQIREIA 
EFYKVMVELE VVPVPGRLLD KMVADMYKEN PEVVEKAWCE AGKMLASYIK AVYGGLDSAL 
SLVPYFSKVI PAKRFDVKAS GDELVVDAVG VGYGVESVKA TAAGARCFLE DLGYEVKEVI 
TAPGILRVRA VKK