| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0216 |
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| Symbol | |
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| ID | 4908121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 217821 |
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| End bp | 218747 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640123968 |
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| Product | ABC transporter related |
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| Protein accession | YP_001055119 |
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| Protein GI | 126458841 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.337663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCATAT CGCTTAGAGG CGTCGAGAAG CGGCTCGGCG GATTTTTCCT CGGCCCCATT
GACCTAGAGG TAGAGAGGGG GGGCCGCGTC GCCGTCTTAG GCCCCTCGGG GAGCGGCAAG
TCCACGCTTT TGAGGATAGT GGCGGGGCTC CTCAGGCCTG ACAAGGGGCG GGTCTACATA
GGCGGGAAAG ACGTCACCTG CAAGCCGCCA TGGGCCAGGG GGGTGGGGGT CGTGTTTCAA
AGCCCAGCCC TCTTCCCCTC TCTAACCGTG TTGGAAAACG TGGCTGAGCC CCTCCTCTCC
CGCGGCGTGA GGAAGAGCGA GGCGTTTGAG AAGGCGAGGC ACGTCCTTGA GAAAGTTGGG
CTTGGGGGGC TTGAGGGGAG GTACCCCTCG GAGCTTAGCC GGGGACAACA GCAGAGGGTT
GCGCTGGCGA GGGCCCTCGT GGTGGAGCCC GAGGTGCTCC TCTTAGACGA GCCGCTCACG
GCCCTCGACG CGCCTCTTAA AAACGAGCTT CTGCCCTACA TATACGAGGT GGCGAGGGGG
AGGACCGTGC TGTACGTCAC ACACGACTTC GAGGAGGCCA CCTACATCTC GGAGCGGGTG
GTGGTGGTCA TGGGGGGCAA AGTGGCGGCC GAGGGAAAGG CGGTTGAGCT TTTTGAAAAC
CCGCCCTCTC CCCACGTGGC CAAGCTCTTG GGCTACTCCA ACGTGTTAAA GGCGCCGTGT
GGATACCTCT ACTTCCGCCC CTGGGACGTA GAGGAGGAGG GCCCGCTCGA GGGGAAGGTC
GTCGGCGTGT GGTACAGGGC TGGGAGATAC GAGGTAGTGG CAGTGGTGGG CGAAGCCGCC
GTGCGGCTCA TCTTGGCCAA GCCCCCGGCC TCGTCCACTA TACGCTTTAA GGTCTCCAAG
GGGGTCTGCT TTCCTCAGAA GGCGTAG
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| Protein sequence | MAISLRGVEK RLGGFFLGPI DLEVERGGRV AVLGPSGSGK STLLRIVAGL LRPDKGRVYI
GGKDVTCKPP WARGVGVVFQ SPALFPSLTV LENVAEPLLS RGVRKSEAFE KARHVLEKVG
LGGLEGRYPS ELSRGQQQRV ALARALVVEP EVLLLDEPLT ALDAPLKNEL LPYIYEVARG
RTVLYVTHDF EEATYISERV VVVMGGKVAA EGKAVELFEN PPSPHVAKLL GYSNVLKAPC
GYLYFRPWDV EEEGPLEGKV VGVWYRAGRY EVVAVVGEAA VRLILAKPPA SSTIRFKVSK
GVCFPQKA
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