Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0206 |
Symbol | |
ID | 4909685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 204580 |
End bp | 205761 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640123958 |
Product | Formyl-CoA transferase |
Protein accession | YP_001055109 |
Protein GI | 126458831 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.640391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATCT ACCCGCTGAA GGGGGTTAGA GTTGTGGACT TGACCTCTGC CATGGCGGGC CCTTTTGCCA CAATGTTGTT GGCGGACTTA GGCGCAGATG TTGTTAAAGT GGAGCCGCCC GAGGGGGACC ACGCCAGAGA TTGGGGGCCG CCTTTCTACG CCGAGAAGTA CAGCGCCTAC TTTGCCTCAA TTAATAGGGG GAAGAGGTCT ATTGTTATAA ATCTAAAAGA GGAAAAGGGG AGAGAGGTCT TGTACAGACT TGTAAAAAGC TCTAGGGTCT TCATAGAGTC TTTTAGGCCC GGCGTGGCAG AGAAGTTGGG CATAGACTAC AGGACGATCT CTAAGATAAA CCCCGACATA ATTTACTGCT CTATCAGTGG ATTTGGCCAA TACGGCCCCT ACAGAGACCT CCCTGGCTAT GACCTCATAG CCTTGGCCAT GAGTGGGCTA ATGGATTTAA CAGGGGAGCC GGATAGGCCG CCTGTAAAAT TCGCCGTGCC TATAACCGAC ATAGTGACTG GCATGTACTG CGTAATTGCG ATACTGTCTC ACCTCTACGC CGGAGTCGGC GGATACATCG ACATGGCTCT TCTGGATAGC GCGATTTCGC TTCTAACCCA CCAGGCGGGG TACTACTTTG CCTCAGGCAA AGACCCCCAG AGGATGGGGA GCGCACACCC CACAATTGTC CCCTACCAAG CGTTTAAGGC CAGAGACGGG TACTTCATAC TCGCCGTGGG AAACGACCAC CTCTGGAAAA TGTTCTGCGA GGCGATAGGG AGGAGAGATT TGGCAGAGGA CGAGAGGTTT AAGACAAACT ACGACAGAGT AAAAAACCGA GACCTGCTAA TCCCCCTACT CGAGGAGATC TTTTCCAAAG AAGATGTGGC CTATTGGGTT GAGAGGTTGA GAAAGGCGGG CGTCCCCGTC GCGCCTGTAT ACAAGGTAAG CCAAGTGGTC CAAGACCCAC ACGTTAAGGC AAGAGGCATG GTCGTAGAGA CGGAACACAG AGAGATTGGA AAAATATTGA CGTTGGCAAA TCCCATAAAA GCCACGGCCA TAGACGTGGG CAACTACACA CCGCCTCCCA AGCTGGGGGA ACACACTGAG GAGGTGTTAA AAGAGCTGGG GTATACCGAG GGGGAGATCG CAGAGCTGAA AAAGAGGGGG GCTGTGGCGT AG
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Protein sequence | MPIYPLKGVR VVDLTSAMAG PFATMLLADL GADVVKVEPP EGDHARDWGP PFYAEKYSAY FASINRGKRS IVINLKEEKG REVLYRLVKS SRVFIESFRP GVAEKLGIDY RTISKINPDI IYCSISGFGQ YGPYRDLPGY DLIALAMSGL MDLTGEPDRP PVKFAVPITD IVTGMYCVIA ILSHLYAGVG GYIDMALLDS AISLLTHQAG YYFASGKDPQ RMGSAHPTIV PYQAFKARDG YFILAVGNDH LWKMFCEAIG RRDLAEDERF KTNYDRVKNR DLLIPLLEEI FSKEDVAYWV ERLRKAGVPV APVYKVSQVV QDPHVKARGM VVETEHREIG KILTLANPIK ATAIDVGNYT PPPKLGEHTE EVLKELGYTE GEIAELKKRG AVA
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