Gene Pcal_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0202 
Symbol 
ID4908431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp200503 
End bp201315 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content63% 
IMG OID640123954 
ProductExsB family protein 
Protein accessionYP_001055105 
Protein GI126458827 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGT GCAAGGCTGT CGCAGTGGTG TCCGGGGGGC CTGACTCCAC TTGCTACACA 
GCGCTGTGGA TGAAGCGGGG GTGCGACGTC CACGCCCTGT CCTTCCTCTA CGGCCAGAAG
GGGGCTGTGG AGGTGGAGAA GGCCCAGGCG GTGTTGAAGA GGCTGGACGA GCTTGCGGCT
AAGCGGGGCT GGGGCCGTGT GGTGGAGCAC AAGGTGGTGG ACTTGTCCTC CCTTGGGGAG
CTGTGGAGGG GCACTCAGCT CACGGACGCG GGGGTGGCGG TGGAGCGCGA GTACGCGCCC
ACGGTGGTTG TCCCCATTAG GAACGTGGTT ATGGCCGCCG TGGCCACGGC TTATGCCTAC
ACTCTGAGGG CGGTGTCTGG GGCAAAGGTG TACGTCATCC TCGGCTCTCA CTACGATGAC
ATAAGGCCGA GGGAGGACAC GTGGGAGCCC CTCTACCCCG ACTGTAGCCC CGAGTGCTTC
GAGGCGTTGC AGGCGGCGTT TAGGATATGC CACTTCCGCG GCGAGAGAGA CGTGGAGCTG
TGGACTCCCT CGAGGGAGGG GTTGCGCAAG TCTCAGCTGT TGAAGCTCTG CTACGACGAG
GTGGGCAACT TGGTGTATGA GACTTGGTCG TGCTACCTCT CCGACGAGGC GCACTGCGGG
AGGTGTGAGA GCTGTAGGAA TAGACACAGG GCCTTCCTGG AGGCGGGCCT CCCCGACTGC
ACTGCCTACC TCTCGCCGCC TGGCGACGGG TTTGAGAAAA GGGGCAACTT CTACATCCAC
GTGAGCTGCA CTCACCGGCA GAGTCGCTTG TAG
 
Protein sequence
MAKCKAVAVV SGGPDSTCYT ALWMKRGCDV HALSFLYGQK GAVEVEKAQA VLKRLDELAA 
KRGWGRVVEH KVVDLSSLGE LWRGTQLTDA GVAVEREYAP TVVVPIRNVV MAAVATAYAY
TLRAVSGAKV YVILGSHYDD IRPREDTWEP LYPDCSPECF EALQAAFRIC HFRGERDVEL
WTPSREGLRK SQLLKLCYDE VGNLVYETWS CYLSDEAHCG RCESCRNRHR AFLEAGLPDC
TAYLSPPGDG FEKRGNFYIH VSCTHRQSRL