Gene Pcal_0192 details

Gene Information

• Locus tag: Pcal_0192
• ID: 4909344
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 185454
• End bp: 188873
• Gene Length: 3420 bp
• Protein Length: 1139 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640123944
• Product: hypothetical protein
• Protein accession: YP_001055095
• Protein GI: 126458817

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 30
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCTGTG AGTTTTATGA GAGGCTGGCG GCGGGGCCTC TTGGCCGGCT GTTGACGGAG 
AGAGGGGATC GCTTTTTTAA GGTTGTCAAG CTTCTGGCGG GGGCCTTGCC GTTTGTCTCT 
TCCCTCGCGG AGGTCGCGGA GCTTGTGGCT GACCTAAGCA GGCCCGGTCT CGCGGGTGAG 
CTCGTGGAGC TCATAAAGGC CGCGAAGAGC ACAGGGCGGT GCGACGAGGA GGTCAAGAGG 
GCGGCGGAGA AGCTCGGGGT AAGCGAGGAG TGGCTTAGGA CACTCGTCAA AAACTTGGCC 
GCACTGCCCG AGGTAGACCT CGCCAAGCTG GAGGAGAGAT TGAAACGGCT CGGGGAGGGC 
CTCGAACTGT TGAGGCGGCT TAGCCCCCAC CTCCTCGACC TTGGGCAAGT GTTCGTGGAG 
GAGGGCGGCC GCCTCCTCGT GAATAGTCCC TTCGGACCTG TGGAGTACGT GGAGGTGGGG 
GTTGAGGACG AAGTGCGCCG GGCCCTCTCC AGCGGCCGCG TCGTAGTGGT GTGTGGGCCG 
AGGGGCGTTG GGAAGAGCAC AGTAGCCCTC AAGGCCATAT ACGACTTCGC GAAAGCCCAA 
CCGGACAGAG CGGTGGTAGT GGTGCGAGTG GGCGAGGACT GGAAAGAGGC CCTGAGGGCG 
GCTGCGCGGC TACGGGATGG GCCCTTTGTC CCAGTCCTCT ACTACGACAC ACTTGAGGTC 
GGGGGATACA GGAGACGTGG TGAGGGCATA GATGTGATGT ACAGCGCCAT GGCCCATGCC 
AAGCCCCTTG CCGACTTTCT ACACGACGCG GCCCTCCTCA GAGTGCCCAC TGTAGTGGTT 
CTCACTGAGG AGGACTACCG GGCCTACGAG GACGTGGCCA ACCTCGTGGG CGCTGAGGCG 
GTTTGTATGG GCGGCGAGGC CGAGGCCCTT GTGAGGGGGA TTTTGAGGGG CGTGCCCGAC 
GCCGTGGCTG AGGCCGTCCT TGAGCGGTAC AGGGGCGAGT TCTACGCCGT TGCCGCCGCC 
TTGGCAAGAG CGCTTTACGA GGAGTGGAGA GACCCGGCGA AGGTGGCAGA GGCGGTGAAG 
AGGCTGGACG TCTACTCTCT GGCGCTCGCC TACCTCTGGC ACGTGGTGTT GGGAGGCGAT 
GAGGCAACTG CCAGGCAAGT TGCGCCCCTA ATCCTCGCCA CCGGCCTCTT TGGCCCACAC 
CCACCCAAGC TGGCAAAGGC CGTCATAAGG GTATTCGGCA AAGAGCCAGA GGAGGCGGTA 
GTGCTGTGGT TTTCTCAGCC GCTACACGGC ACTCTCTACG AGACAATACG AAAGGTGGCC 
CACGGCGCCG TCTATAGGCG GTTCGGCGTT GGAGACGACG AGCTGTGCCA GGGTAGCGCG 
GAGGGGCCGT GCCGCCTCGT GGAGATTTGT GCGGAGGCAC TTGTAGGGGT CCCGCGGAGG 
AGGTACAGCG GAATAGAGGA GATGGCAGTG GAGTACGCCA AGGTTATCGC AGAAAAGTTC 
AAAGCCCCTG GGCCCGCTGG CATGCGGCAA ATAGACTACC TCATCGACAA CTTCCTACAA 
GCCTTCAACG GTGTAGCCGA GGACGGGCGC TGGAAGATAA GATATGAGAC TAAGACGCCC 
TGGGGCATTG AGATAGTCGA AAGCGTCGTA GACGAGTTGG ACATCTTGTC GGCACTATAT 
GGACTGGCGG TATTGCCAGA CTGGAGCCGC TTGCTGAAGC CACTGGAAGA TTGGTTCTTT 
GTTGGCGATG AAAGAACCAA CGCTGTGGGG CCATACCTTT TCTTTAATCT GAAGGAGGGG 
AGTAGGAAAC TGGCCAAGAG GGCCGTGGTA ATCGCAAAGG AGGTTGAGGA AAGAGGTTTC 
TATACTCATG TAGACCTTTG GCGAGCCGTG GGTATTGCGG CAACTGGCGA CTGGAGTAAC 
GCCACAGACG AGGAGCTAGA GAATGTCGTA AGACTGCTCG ATTATGTATT TGGAAGATTT 
GCAAGCGTCT CAACACAACT TTTACACGGT GTAGAGCCGC CGCTCGCTGA GGCTTGGCGC 
AGAGTCGAAA GTGGGAGGGC GTCTTCGCGG CTTGCCGACT GGCTAGCTAT GGCGACTCAC 
AACGTTGCCA GAAGCTCGCC TGTTGGTCTG CTATTCTTTT TCACGATTGC AAAAGACAGT 
CAAGCGCCTC TGGCTCAACG CTTTGCCGCA TTATACAACG CAGGTTCCAA CGTTGCCAAG 
TTGTGGCTCC TCAACACGCT CCTCTACGCA CTTGTCTCGC CAGTGGGACT TATTGTTGCC 
GCTGGGTCGT TGAACACGCA GGTAGAGCCA TGGGAGACGT TTAAAGAACT GGCTAAACGC 
GTGGAGGAGT TTGTATCACG ACTTAACGAT GTTGAAAAAG CGTATGCCGT AGCGCTTTTA 
CATCCGCGGC TTGCCTATTG GTATTCTCTA TTTGACGAAG TAAGCAAAGC GGAGAAATTT 
GCAGACAAAG CGGTGGGAGC GTTGGAAGAG CTTAAGCGAT CCTACACTGA AGACAGAGTG 
TCAACTGAGG AGAAGTTGTG GGAGTATCTG AGGGTGATGC AAATAAGGCC AGACCTGAGG 
AAGGAGCTTA GTGGTCTCAG CGCATATGTC CACTATCACG TGGCCTTCGC TTATATGGTC 
GCTGACGACT TAGAGAAAGC CGCAAAACAT GCAAAATTGT CATACGAACT GGCTATGGAG 
TCTGGGGAAG TATACTATGA AGTCGCATCG TGTAGTCTGT TGGCGAGGCT AAAGGCTGTT 
AAAGAGGGTG CCCCTCCCGT TGAAGAGTTT GAAAGGGCAT GGCTGAGGGC GTTGCAAGAC 
GTTAACAGTC TTGGCGTAGA GGCGATTGCC AACGCGCTTG GCCACTATGT AGTGGCCCTG 
GCCTCTGTGG GCCGCCTCAG CGACGTAAAG AAGGTGTTGG AGGAGTGGGG GTGGGCGTTA 
GAGCGCGACC TCGACGCATC GGCCCTCACC TACGGCGTCC TCTCCCTCTT AGATGGAAGG 
TATTTGGGAA AGGCCGTGGA GTACCTCCCC GAGTGGGCCA GGGCTAATCT GCCAAAGTTT 
GTCGAAGTGT TGTACGAGGC GGTTGATGCC GGCCTATTTG CCGAAGGCGA TGCCGAAGCC 
GCCACGAGGT CTATTGAAGA GAAGTATGGC CAAGAGGCAG AAAAGGCGTT GACTTGGACC 
ACGTTAGATT CTGGGAAGCT CTTCTTATCT GCCCTAGTTG GCCTGGCCTA TTGTGAGAGA 
GGCGAGGAGT GGGGTCTTAA CCTGGCGAAG GTGACGTCTA GGCATGGTTC ATCGAGTAAT 
GGTCTCCACG GCCGCTTGTT CCGTGAATTG GCCAAGGCGC TGGAGGAAAC GACCGTAGGC 
AACTGCATTA CCGACGAAGT GCTTAAGGCG GCGTATAAGC TTTATTACTC CCAAGTCTAG 

 

Protein sequence

MSCEFYERLA AGPLGRLLTE RGDRFFKVVK LLAGALPFVS SLAEVAELVA DLSRPGLAGE 
LVELIKAAKS TGRCDEEVKR AAEKLGVSEE WLRTLVKNLA ALPEVDLAKL EERLKRLGEG 
LELLRRLSPH LLDLGQVFVE EGGRLLVNSP FGPVEYVEVG VEDEVRRALS SGRVVVVCGP 
RGVGKSTVAL KAIYDFAKAQ PDRAVVVVRV GEDWKEALRA AARLRDGPFV PVLYYDTLEV 
GGYRRRGEGI DVMYSAMAHA KPLADFLHDA ALLRVPTVVV LTEEDYRAYE DVANLVGAEA 
VCMGGEAEAL VRGILRGVPD AVAEAVLERY RGEFYAVAAA LARALYEEWR DPAKVAEAVK 
RLDVYSLALA YLWHVVLGGD EATARQVAPL ILATGLFGPH PPKLAKAVIR VFGKEPEEAV 
VLWFSQPLHG TLYETIRKVA HGAVYRRFGV GDDELCQGSA EGPCRLVEIC AEALVGVPRR 
RYSGIEEMAV EYAKVIAEKF KAPGPAGMRQ IDYLIDNFLQ AFNGVAEDGR WKIRYETKTP 
WGIEIVESVV DELDILSALY GLAVLPDWSR LLKPLEDWFF VGDERTNAVG PYLFFNLKEG 
SRKLAKRAVV IAKEVEERGF YTHVDLWRAV GIAATGDWSN ATDEELENVV RLLDYVFGRF 
ASVSTQLLHG VEPPLAEAWR RVESGRASSR LADWLAMATH NVARSSPVGL LFFFTIAKDS 
QAPLAQRFAA LYNAGSNVAK LWLLNTLLYA LVSPVGLIVA AGSLNTQVEP WETFKELAKR 
VEEFVSRLND VEKAYAVALL HPRLAYWYSL FDEVSKAEKF ADKAVGALEE LKRSYTEDRV 
STEEKLWEYL RVMQIRPDLR KELSGLSAYV HYHVAFAYMV ADDLEKAAKH AKLSYELAME 
SGEVYYEVAS CSLLARLKAV KEGAPPVEEF ERAWLRALQD VNSLGVEAIA NALGHYVVAL 
ASVGRLSDVK KVLEEWGWAL ERDLDASALT YGVLSLLDGR YLGKAVEYLP EWARANLPKF 
VEVLYEAVDA GLFAEGDAEA ATRSIEEKYG QEAEKALTWT TLDSGKLFLS ALVGLAYCER 
GEEWGLNLAK VTSRHGSSSN GLHGRLFREL AKALEETTVG NCITDEVLKA AYKLYYSQV