| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0190 |
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| Symbol | |
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| ID | 4908974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 182799 |
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| End bp | 183965 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640123941 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001055093 |
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| Protein GI | 126458815 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCC CCCGAGCCGT TCGGTACGTG TTGCTCACCG CGGCCGTACT CCACATGATG
GGGTTCAGCG CCGTTGTGCC AGTCACCTCG ACCCTAGTCA AGTCTCTGGG CGGGGACTCC
GTGGTACAGG GGCTTTTGGC CTCTGCGTTT ACCCTCGCCC AGCTCGTCTC TGCGCCTCTG
TGGGGCTGGG CGTCGGACAG GTTGGGCAGG CGGGTCATAA TCGCCGTGGG CCTCGGCCTC
GCGGCCATAG GCCACGCCGG CCTCTACCTC GCGAGAGACC TCCCCACAGC CTTCGTCGCC
AGGGCGGTGT CCGGCCTAGG CGGAGGGACA CTCCCCGTGA TACAGGCGGC AGTCCTGGAG
CTCAGCCGGC CGGAAGAGAG GGCCGCCTCC ATGGCGCAGT TCGGCGCCGC CCTTGGCATA
GGCTTCGTCG CCGGGCCGCT CCTGGGAGGA GCCCTGTCGA TACTATCCCC AAGAGACCCA
TTCCTCGCGG CGGCCGTCCT CTCCGCCACA GCCGCGCTGT GGTCAACCGC GGTCTATGAG
TCTGCTCCCA CGGCCGCTCC ACAGCCCAAG GCGGAGGGGA GGGGGGCGGG GGTAAACCCG
CTCTACCTCG TGGTATTCTT CCTCTTAAAC GCCTCCTACG CCCAGCTCGA GGCCTTCATC
TCATTCTACG GGGGAGACCT CGGTCTGCGG CCCATGTACG TCGGCATCGC CATGAGCCTC
GCCAGCGCCG CCGCAGTCAC CGCACAGACA GTGGTAAAGA GGCTGGAGAA AGAGCGCCCA
ACGGACAGCG ACATAGCCAT AGGACTGGCA GTCATGGCCG CGGGGCTAGC CACCGCGGCA
GTTCCAACCC CCTACACGTA CTTCACAGGC GTGGTAGTGT CCGCCGCCGG GCAAGTAATC
GCCACAGCCT TCATCTCCAA GGCAGTGGCA ACAAGCGCCA ACAGAGTAGG CCTAGCCTTC
GGCGAAATGC AGGCAGCCGG CTCGCTGGGA AGACTCGCGG GGCCCGTAGA CGAGGGCCTC
TTATACAAAA CCCTCGGCCC CACACCCTCC TTCCTCGAAG GAGCCGGACT AGCGGCAATG
GGACTACTCC TCATCATCGG AGCCACAAGG CTAAACCTCA CCCCCACCCT GCCCACCCTA
AGCCAAGACA AGAGAGAAAA GGCGTAA
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| Protein sequence | MAGPRAVRYV LLTAAVLHMM GFSAVVPVTS TLVKSLGGDS VVQGLLASAF TLAQLVSAPL
WGWASDRLGR RVIIAVGLGL AAIGHAGLYL ARDLPTAFVA RAVSGLGGGT LPVIQAAVLE
LSRPEERAAS MAQFGAALGI GFVAGPLLGG ALSILSPRDP FLAAAVLSAT AALWSTAVYE
SAPTAAPQPK AEGRGAGVNP LYLVVFFLLN ASYAQLEAFI SFYGGDLGLR PMYVGIAMSL
ASAAAVTAQT VVKRLEKERP TDSDIAIGLA VMAAGLATAA VPTPYTYFTG VVVSAAGQVI
ATAFISKAVA TSANRVGLAF GEMQAAGSLG RLAGPVDEGL LYKTLGPTPS FLEGAGLAAM
GLLLIIGATR LNLTPTLPTL SQDKREKA
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