| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0187 |
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| Symbol | |
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| ID | 4909394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 178359 |
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| End bp | 180158 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640123938 |
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| Product | hypothetical protein |
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| Protein accession | YP_001055090 |
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| Protein GI | 126458812 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTGTC AACGCCAGCT GGAGGGGTAC AGGCGCTATG TCGAGTTGGC AAGGTTTAGG
AGTGGAAAGT GCCGCCTCCC CGGCCGCGCG TGCGGCTACG CCGAAGCCGA TATACGGCTG
ATGTGGCAGT ACATTGAGGA CACGGCGTCG CTGTGCGGCA ATCTCATCAA GGCGCTGGCG
GAGGCCGAGT GTAAGTTCCG GGAGCTGGGG ATTAAGGGAC TGGAAAAGGG CTATAGAGTG
GGAGTGACGA GGCCGGACAA ATCAAGGCCA GACCACGAGA TAGTGACGCT GTACCTCAAG
AAGCCAGTAT ACGCCACGAT AGTGCTGTGG GAGAAGAGAT TGTACATCTT CTACGACGAT
GTGCCCATAG GCAATGGGCT GAGGGGGGAG GAGCTGGAAG AAACGGCGAG GAAGACTGGG
CGGGCTGGCG TCCCCGTAGA GACGTATGAG GTGGACGAGG AGTACAAGCG GCTGTGGCTT
GAGGTGCCGC TACCGAAGTC TGCGTCTAAA CTACTGGGCG GAAGAGACAA GACACCGATT
GTGCTGTTTA GGAATTTGGG CTGGCTGTTG AGTGACGATT GGCGTAAAAA CCTTGGACAT
GCCGCTGGTA ATCCTGGCCA AGTTGCGGTG AGACTGTTCG ACTGGATTGC CCTAGCAGAG
TACGCTATGG AGAGGGGGAT TACGCCAAAG GCGCCCCTGG CGTTTACGCT GAGAATTCGC
AAGGTGACTA AGACAAGGCA CGGCGACAAT CCCACAGTTG AGGCGTGGCC CACAGGCGCT
ACCTACGAAG CGCTATTTGT CGCCTACGAC TGGTTTGGAA TAACGTTGGG AAGTACAGAG
GAGGTGCTAA TGCGGGGCTA CTCCGCGTTG AAGGCGTTGA GAGAGGATGC GTTTAAGCTC
GACGGAAGAA TGTACGTCGT AAGCAATGTG GGGGCGTGGA TTGCCTTTAG CAACGCGGTC
GACATGTTGG TCGTCGGCGA CGGCTACGTG TTGCCGTATG AGGTGAGGAT AGCCGTTAAG
ACGACGCCCA GGGCCACGCT GGCAGGAGAG ACGAGTCTGC TGGAGGAGCT CGCCGATGCT
GTCGGCGGAA CAACCGCCGG AGACTACGTA AGACTACAGA CATGGCACAT GCGCCTGCTT
TTGCCAACTC AGCCTACGCC GGCCTTGGAG AAGACGGCCA GGCTATTTGA GACGCTGGCA
AACTACCCAG CGGCCGCTAT AGTAGAGGTC AACGGCATTA CATATCTGCT TACACATAAT
GGCGGTGGCG AGTTCGTGAT TGGAAGGGGG AGGGCCGTAG AGCTGTATAA CGCCCTAGAG
CGGCTTGGGA TAAAGGAGAG GTTCAAGAGG AACTTGTTGT TACTCACCTA CGCCCAGCTT
GAGGAGCTGG CGAGGCGTGG CTTCACCGTC AGATTCCTCA ACGACATGGA GAAAGATGCG
GTGAGAGAAG TTAGGCCAGC GTTGCCGACG CCCGACTTAG ACGCCGTTAG GCGGGTGTTA
GAGGAAGTGG CCAAAATGGC GAGAATAGTG GCGGCTACAG ACAGAGGCCG GCTCTACATC
AGGATAATTC CACACGACAA GTCTAAGGTG GAAGAAATAG CGGCCAAGCT AAGGGCAGTG
GGGATAAGAG CCACAATACT ACACAAGAAA AAGGAGGTAA GAATACACGA ACAAAAGTCG
GTAGAAATAA TCCGTAGGAT AGCCCCCCAC TTTTTTCACC CACTTTACAT TCCTCTACAC
AAAGCTCTTT TGCTGATTCA TTATCAAACA ATTTTGGCAT CACCATTTAC AAAAAACTAA
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| Protein sequence | MECQRQLEGY RRYVELARFR SGKCRLPGRA CGYAEADIRL MWQYIEDTAS LCGNLIKALA
EAECKFRELG IKGLEKGYRV GVTRPDKSRP DHEIVTLYLK KPVYATIVLW EKRLYIFYDD
VPIGNGLRGE ELEETARKTG RAGVPVETYE VDEEYKRLWL EVPLPKSASK LLGGRDKTPI
VLFRNLGWLL SDDWRKNLGH AAGNPGQVAV RLFDWIALAE YAMERGITPK APLAFTLRIR
KVTKTRHGDN PTVEAWPTGA TYEALFVAYD WFGITLGSTE EVLMRGYSAL KALREDAFKL
DGRMYVVSNV GAWIAFSNAV DMLVVGDGYV LPYEVRIAVK TTPRATLAGE TSLLEELADA
VGGTTAGDYV RLQTWHMRLL LPTQPTPALE KTARLFETLA NYPAAAIVEV NGITYLLTHN
GGGEFVIGRG RAVELYNALE RLGIKERFKR NLLLLTYAQL EELARRGFTV RFLNDMEKDA
VREVRPALPT PDLDAVRRVL EEVAKMARIV AATDRGRLYI RIIPHDKSKV EEIAAKLRAV
GIRATILHKK KEVRIHEQKS VEIIRRIAPH FFHPLYIPLH KALLLIHYQT ILASPFTKN
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