| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0186 |
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| Symbol | |
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| ID | 4909399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 177439 |
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| End bp | 178170 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640123937 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001055089 |
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| Protein GI | 126458811 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACAG CCGTTGTGAC CGGGGGCTCC ACGGGAATAG GCGCGGCCAC GGTAAAGGCC
CTGGCCAAGG CGGGCTACAA CGTGGCCTTC ACCTACCTAC GCAACAGAGA CAAGGCGGAG
GAGGTGACCA GAGAGGCGGC GTCCCACGGA GTGAGAGTAA TCCACCGCGC CGCCGACGCC
ACCTCCTGGG AGGAGATGGC ACAATTCGCC GAAGAGGTCA AAAGGCAGTT CGGCAGAGTA
GACGCCCTCG TCGCCAACGC AGGCGGCCTG CCAGAAAGGC GCACCCTCGA CGAGTCAGCC
CTAGACTACT GGCGCCGCGT AGTAGACCTA AACCTCACCA GCGCCTACAT AGCCACAAAG
CTCTTCACCC CCCTCATGGA GAAAGGCGTC GTGATATACG TCAGCTCAGT CGCCGCCTAC
ACCGGCGGAG GAAGAGGCGC CTTCGCCTAC GCCGCGGCAA AGGCTGGGTT GCTCGGCCTC
ACCAGGGCAC TCGCAAAAGA GCTCGGCCCC AGAGGCATCA GAGTAGTTGC AGTCCTCCCC
GGCCTAATAG ACACCCCATT CCACCAAAAG GCAGGGACGG GAGACATCCA CGCCTGGGCC
GCCAACGCGG TGTACCTAAG GAGGGTTGGG ACGCCTGAGG AGGTGGCAGA GGTAATAGCC
TTCCTAGCCA GCGAAAAAGC CTCCTACATA AACGGCGCCT TCATAGACGT CAACGGAGGC
TGGTACGGGT AA
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| Protein sequence | MPTAVVTGGS TGIGAATVKA LAKAGYNVAF TYLRNRDKAE EVTREAASHG VRVIHRAADA
TSWEEMAQFA EEVKRQFGRV DALVANAGGL PERRTLDESA LDYWRRVVDL NLTSAYIATK
LFTPLMEKGV VIYVSSVAAY TGGGRGAFAY AAAKAGLLGL TRALAKELGP RGIRVVAVLP
GLIDTPFHQK AGTGDIHAWA ANAVYLRRVG TPEEVAEVIA FLASEKASYI NGAFIDVNGG
WYG
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