Gene Pcal_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0157 
Symbol 
ID4910003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp151289 
End bp151573 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content56% 
IMG OID640123907 
ProductthiamineS protein 
Protein accessionYP_001055060 
Protein GI126458782 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1977] Molybdopterin converting factor, small subunit 
TIGRFAM ID[TIGR01687] MoaD family protein, archaeal 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGTCA CTGTAAAAAT ATTTGGGCCC AAGTACTTTG GTCTGCCGCA GTACGACGTT 
GTAACACACG TCTTTGATCT CCCAGACGGG GCCACGGTGG GGGACGTGGT AGACCTTTTG
GAGAAGATGT ACCCAGGGCT TAGGGGGAGG ATTCTGAGGG GCGAGGAGAT AATCCCTATG
CACGACATAT GGGTCAACGG GCGCTCTATC CAGTTTCTCC AAGGCCTCGC CACGAGGCTA
AAAGACGGCG ATGTTGTACA ACTGGTGCCC CCCTTCGGCG GCTAG
 
Protein sequence
MRVTVKIFGP KYFGLPQYDV VTHVFDLPDG ATVGDVVDLL EKMYPGLRGR ILRGEEIIPM 
HDIWVNGRSI QFLQGLATRL KDGDVVQLVP PFGG