Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0154 |
Symbol | |
ID | 4909508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 147598 |
End bp | 148722 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640123904 |
Product | citrate synthase |
Protein accession | YP_001055057 |
Protein GI | 126458779 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.649155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTACT TCCCAGGGCT GGAGGGGGTG GTGGTAAAAG AGACTGAGAT CTGCCACATC GACTTGGAGA ACTCGAAGAT ATACTACAGG GGCTACGACT TGGAGGAACT CGCCGAGAGG TCCACCTTTG AGGAGACGGC GTACCTACTG CTCTATGGAA AACTCCCCAC CCGCGGCGGG CTTGAGCAGT TCAAGGCCGT GCTGAGGGGC AACAGAGCGC CGCCTCAGCA CGTCACCGCC GTACTCCAGC ACTTGCCCAA GTCGGCGGAG CCCATAGACG TGTTGAGGAC TGGGGTGTCG GCCATGGCAC ACGGGGAAGA TCTCAGGGAC AGATCCCCCG AGGCCGAGCT CGCGAGGGGG GTGCGGATTA TGGCGGCGAT GCCGTACATA GTTGCGGCGT GGCACAGAAT TAGGACAGGC CAACAGCCCC TTTCGCCAGA CGCCGACAGC CACGCGGAGT ACTTCCTAAA GGCCCTAAGG GGTAGCGACG TCTCCCCCCT AGAGGCGAGG GCGATGGACG TCATGTTGAT AATATACGCC GAGCACAGCA TGAACAACAG CGCCTTCACC GCAGTCACAG TGGCCTCCAC TCTCTCCGAC ATGTACGCCG CTGTGACAGC CGCCATCGCC AGCCTCAAAG GCCCACTACA CGGGGGAGCC AACGTGGATG CGGCCCTCAT GATAGAGGAG ATAGGCGACG AGGGGAACGT GGAGAAGTGG GTAGACGCCG CGCTGGCCGC CGGGAGGAGG ATACCCGGCT TCGGCCACAG GCTGTACAAG AGGGGGCCCG ACCCGCGGCT GAGGGTATTG CGAAGACTCG CCAAGGAGCT AGCCTACGCC AAGGGAGACA CCAAGTACTA CGCCATTGCC CAGAGACTTG AGGAGTACGT CACGGCAAAG CTCGCCGCCA AGGGCATATA CCCCAACACA GACCTCTACG CCGCGGTGAT ATTCAAATAC CTAGGCCTCC CCGTGGACAT AAACCTCCCC ACCTTCGCCA TATCCAGAGT AGCCGGCTGG GTGGCACACG TCGTGGAGTA CAGGAGGAAG AACAGGCTGA TACGCCCCAC CGAGAAGTAC ACAGGCCCCA TAGGGCTGAA ATACGTGCCA ATAGAAGAAC GCTGA
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Protein sequence | MAYFPGLEGV VVKETEICHI DLENSKIYYR GYDLEELAER STFEETAYLL LYGKLPTRGG LEQFKAVLRG NRAPPQHVTA VLQHLPKSAE PIDVLRTGVS AMAHGEDLRD RSPEAELARG VRIMAAMPYI VAAWHRIRTG QQPLSPDADS HAEYFLKALR GSDVSPLEAR AMDVMLIIYA EHSMNNSAFT AVTVASTLSD MYAAVTAAIA SLKGPLHGGA NVDAALMIEE IGDEGNVEKW VDAALAAGRR IPGFGHRLYK RGPDPRLRVL RRLAKELAYA KGDTKYYAIA QRLEEYVTAK LAAKGIYPNT DLYAAVIFKY LGLPVDINLP TFAISRVAGW VAHVVEYRRK NRLIRPTEKY TGPIGLKYVP IEER
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