Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0145 |
Symbol | |
ID | 4908824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 140459 |
End bp | 140986 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640123896 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_001055049 |
Protein GI | 126458771 |
COG category | [R] General function prediction only |
COG ID | [COG1896] Predicted hydrolases of HD superfamily |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTCC TCTCGGTCGT AGACACGCTC TGCAATACGC CGAGGGTTGG GTGGCTCCAG AGGGGCGTCT CTAACGCAGA GACGGTGTGC GCCCACTCTC TGTTGGCCAC GTTGCTGGCG GCGGAGGTGG CGGCTAGGCT GAGGGCAGAG GGCGTAGACA TCGACGTGGA GAAGGTGATC GCCGCCGCGG CGGTCCACGA CCTGGCTGAG GCGTACCTCG GCCACCCGTC GCGGGAGGTG AGGAACCGAC TGCGCTGGGA GGAGGTAGAG GAGGAGGTGT TCAAACGCGA GTTCCCCCAC CTCCTGGAGC TATTCCGCTG GTACCGCTAC GAGGAGAACC TAGTGGGGCG GGTCGTGGCC TTCGCAGACA AGCTCGCCAC GTTGATCCGG GCCTGCCGCT ACCGACAGAT GGGCTATGAC ACAGACGACC TAGTGAAGTC TTTGTACAAG AGATTGCAAG AATACGACGA CTTGGCCCAC CTCCTGGACG TATACGTCTC TGCCTACTGT GGAGGAGTGC CGGCTTGA
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Protein sequence | MSLLSVVDTL CNTPRVGWLQ RGVSNAETVC AHSLLATLLA AEVAARLRAE GVDIDVEKVI AAAAVHDLAE AYLGHPSREV RNRLRWEEVE EEVFKREFPH LLELFRWYRY EENLVGRVVA FADKLATLIR ACRYRQMGYD TDDLVKSLYK RLQEYDDLAH LLDVYVSAYC GGVPA
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