Gene Pcal_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0145 
Symbol 
ID4908824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp140459 
End bp140986 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content63% 
IMG OID640123896 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001055049 
Protein GI126458771 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCC TCTCGGTCGT AGACACGCTC TGCAATACGC CGAGGGTTGG GTGGCTCCAG 
AGGGGCGTCT CTAACGCAGA GACGGTGTGC GCCCACTCTC TGTTGGCCAC GTTGCTGGCG
GCGGAGGTGG CGGCTAGGCT GAGGGCAGAG GGCGTAGACA TCGACGTGGA GAAGGTGATC
GCCGCCGCGG CGGTCCACGA CCTGGCTGAG GCGTACCTCG GCCACCCGTC GCGGGAGGTG
AGGAACCGAC TGCGCTGGGA GGAGGTAGAG GAGGAGGTGT TCAAACGCGA GTTCCCCCAC
CTCCTGGAGC TATTCCGCTG GTACCGCTAC GAGGAGAACC TAGTGGGGCG GGTCGTGGCC
TTCGCAGACA AGCTCGCCAC GTTGATCCGG GCCTGCCGCT ACCGACAGAT GGGCTATGAC
ACAGACGACC TAGTGAAGTC TTTGTACAAG AGATTGCAAG AATACGACGA CTTGGCCCAC
CTCCTGGACG TATACGTCTC TGCCTACTGT GGAGGAGTGC CGGCTTGA
 
Protein sequence
MSLLSVVDTL CNTPRVGWLQ RGVSNAETVC AHSLLATLLA AEVAARLRAE GVDIDVEKVI 
AAAAVHDLAE AYLGHPSREV RNRLRWEEVE EEVFKREFPH LLELFRWYRY EENLVGRVVA
FADKLATLIR ACRYRQMGYD TDDLVKSLYK RLQEYDDLAH LLDVYVSAYC GGVPA