Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0143 |
Symbol | |
ID | 4909261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 138673 |
End bp | 139179 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640123894 |
Product | hypothetical protein |
Protein accession | YP_001055047 |
Protein GI | 126458769 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCGCT GTGACCCCGG CGGGGCGCCT CCCCTCTTCT TTATATACCT CCCCGTGTGT AGACGTGTGA GAGGGGCAGT GGTCAGCATA CAGGTGGCGA TTTTGATGGC GGTGATCTTG GCCATAGCTC TCGCCGTGGC TGGGTACCTC ATGACTATGT TTCAAGCCGC GGCGCGGTAT ACCTACATAG CGGTTTTACA GGCCTACGTC TATCCCGGGG GAGGCGGGTC GTGGGTAAAG CTGTGCGTCG CCGCTGGAGG CTCCGACGCG TTGAAGATCG AGAGCGTAGA GCTGGGGGGC GTAAAGGCGT CACGGGTAGA GGTCTACGTG GGCGACTCGC CGCGCGCAGT CGTTAGGGCG GGCGAGACGG CGGTAGTCAA GGCGTTTTTC GACGTGAGAG TGGAATACGG CCAGTCGCTG GTAGGCTGGT TGCATACGGC GGAGGGCTTC AAGTTCCCAT TCACGCCCAC GTACACGGTT GGGGAGCCCA AGTGCCCCTT TGAGTAA
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Protein sequence | MPRCDPGGAP PLFFIYLPVC RRVRGAVVSI QVAILMAVIL AIALAVAGYL MTMFQAAARY TYIAVLQAYV YPGGGGSWVK LCVAAGGSDA LKIESVELGG VKASRVEVYV GDSPRAVVRA GETAVVKAFF DVRVEYGQSL VGWLHTAEGF KFPFTPTYTV GEPKCPFE
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