Gene Pcal_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0143 
Symbol 
ID4909261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp138673 
End bp139179 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content62% 
IMG OID640123894 
Producthypothetical protein 
Protein accessionYP_001055047 
Protein GI126458769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCGCT GTGACCCCGG CGGGGCGCCT CCCCTCTTCT TTATATACCT CCCCGTGTGT 
AGACGTGTGA GAGGGGCAGT GGTCAGCATA CAGGTGGCGA TTTTGATGGC GGTGATCTTG
GCCATAGCTC TCGCCGTGGC TGGGTACCTC ATGACTATGT TTCAAGCCGC GGCGCGGTAT
ACCTACATAG CGGTTTTACA GGCCTACGTC TATCCCGGGG GAGGCGGGTC GTGGGTAAAG
CTGTGCGTCG CCGCTGGAGG CTCCGACGCG TTGAAGATCG AGAGCGTAGA GCTGGGGGGC
GTAAAGGCGT CACGGGTAGA GGTCTACGTG GGCGACTCGC CGCGCGCAGT CGTTAGGGCG
GGCGAGACGG CGGTAGTCAA GGCGTTTTTC GACGTGAGAG TGGAATACGG CCAGTCGCTG
GTAGGCTGGT TGCATACGGC GGAGGGCTTC AAGTTCCCAT TCACGCCCAC GTACACGGTT
GGGGAGCCCA AGTGCCCCTT TGAGTAA
 
Protein sequence
MPRCDPGGAP PLFFIYLPVC RRVRGAVVSI QVAILMAVIL AIALAVAGYL MTMFQAAARY 
TYIAVLQAYV YPGGGGSWVK LCVAAGGSDA LKIESVELGG VKASRVEVYV GDSPRAVVRA
GETAVVKAFF DVRVEYGQSL VGWLHTAEGF KFPFTPTYTV GEPKCPFE