Gene Pcal_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0131 
Symbol 
ID4908366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp127577 
End bp127963 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content61% 
IMG OID640123882 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_001055035 
Protein GI126458757 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCGG TGCCGCTGGC AACGCCCGAG GAGGCGTGGC GCATAGCAAA GTCATTGAAC 
TACCGCCACA TAGGGGGCAC AGTGGTTGCG GTGGTGCAGG ACGTAGAGAC GGGGGAGGTG
CTCATGGTTG GGCACATGGA CCCGGTAGCC GTGGTTCTGA CGCTCACAAC GGGCCTCGCC
CACTACTACT CGACGTCGCG GAAGAGGATT TGGCTGAAGG GCGAGACGTC GGGACACTAC
CAAATAGTGA AAGAGTTTCG GACGGACTGC GACGGCGACG CCGTGGTATT AAAAGTCGTT
CAAATTGGGG CCGCCTGCCA CACGGGGGCT AGGAGCTGCT TCAGCTCGCC CGCCTCTTTC
AAAATCCGCC TAAACCGCGA CGCCTAG
 
Protein sequence
MDAVPLATPE EAWRIAKSLN YRHIGGTVVA VVQDVETGEV LMVGHMDPVA VVLTLTTGLA 
HYYSTSRKRI WLKGETSGHY QIVKEFRTDC DGDAVVLKVV QIGAACHTGA RSCFSSPASF
KIRLNRDA