| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0126 |
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| Symbol | |
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| ID | 4908318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 122483 |
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| End bp | 123064 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640123877 |
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| Product | thymidylate kinase |
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| Protein accession | YP_001055030 |
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| Protein GI | 126458752 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTCATCG CAGTAGAAGG GATAGACGGC AGTGGAAAAA CGACGGTGAT AGCGGAGGTG
GCCAAGGCTC TGCCCCGTGT CTACGTCACG AGGGAGCCCA GCGGCGGGCC CATTGGGAGG
TTGCTGAAGG AGTGGGCGCT GAGGGGGGGC ACGGCGGATC CCCACGTCGA TGCGCTACTC
TTCGCAGCAG ACCGAGTTGA GCACTACAAG AGGGAGATTG AGCCCAAGCT GAGGGAGGGG
TATATAGTCA TAACCGAGAG ATATGTAGAA TCCTCCATCG CGTACCAAGG GGCGGCGGGG
GTGCCCATCG AGTATATACT GTACATAAAC TCCGTAGTGC CCAGGCCCCA CCTCACTATA
ATCCTCGACG TGGACCCGGC GGAGGCTATA AAGAGGATCA AGGCGAGGGA GAGACTTGAG
AAATTTGAAG ACGTGGAGTT CCTCAGACGC GTGCGAGAGA TCTACCTTAC GAGGGCCCGC
GCAGAGGGCT ACCCCGTGAT AGACGCCGGG AGGCCGGCGG GCGAGGTGGC GAAAGACGTG
GTGGCGATTA TTGAGAGAGC TATGGCATCA CTGCGGCGAT AA
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| Protein sequence | MFIAVEGIDG SGKTTVIAEV AKALPRVYVT REPSGGPIGR LLKEWALRGG TADPHVDALL
FAADRVEHYK REIEPKLREG YIVITERYVE SSIAYQGAAG VPIEYILYIN SVVPRPHLTI
ILDVDPAEAI KRIKARERLE KFEDVEFLRR VREIYLTRAR AEGYPVIDAG RPAGEVAKDV
VAIIERAMAS LRR
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