| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0117 |
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| Symbol | |
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| ID | 4910000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 116439 |
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| End bp | 117410 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640123868 |
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| Product | AIR synthase-like protein |
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| Protein accession | YP_001055021 |
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| Protein GI | 126458743 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.634114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTGG GAAAGCTACA TCCCCAACTG CTCCGGCAGT TGGTGCTCGC TAGGCGCGGC
GCGTGGCGGA GAGAGGTGGT GGTAGGCCCC GCCGTCGGCG AAGACGCGGC AATAATAGAT
CTGGGCGGCG CCTATTTGGT CGTCCACACA GACCCCATCT CTGGCTCTGT GAAACTCGTC
GGCAGGCTGG CGGTGTTTGT CTCCACGAAC GACGTTGCGG TGAGGGGGGT GGAGCCCATG
TGGCTTTCGG TTTCGATATT CCTTCCGTCG GCGGCGGGCG AGGGCGATTT GGACGAAATT
GCGCGGCAGA TAGACGAGGC CGCGAGGGAA ATTGGCGTGG CGGTGGTGGG CGGCCACACG
GAGGTCACCA CGGCGGTTAC TAGGCCGGTG GTCGTGGCCA CGGCGATGGG GGTGGGGAGG
CGCTACGTGA CGACCGGCGG GGCGAGGCCG GGGGACTACG TCCTTATGAC GAAGTACGCT
GGGCAAGAGG CGGCGTCTAT ACTCGCAACA GACTTCGGAG AGGAGGCCGT CCGCAGGGGG
GTGGACAAGT CCGCCGTTGA GGCGGCCAAG TCTTTCAACA TTTCGGTGAT AAGGGAGGCA
CTGGCGCTGG CCGATTTCGC CACTTCTATG CACGACCCCA CGGAGGGCGG CGTGGCCGGG
GGTCTCGCGG AAATCGCCTA CGCATCGGGC GTCTCCATAG TAGTGGACAG AGGCGCCGTG
TTGACTAGGC CTGAGATAGA GGCGCTGTGC AGAGCCTTTG GAATAGACCC CTTGAAGACC
CTTAGCTCGG GCGTCCTACT CGCCACAGTG CCGCCCAACC AACTCGACGC GGCCCTCAAC
AAGCTTAGGG GCCTCGGCGT CCCCCACGCG GTAATTGGCC GAGTAGTAGA GAAGTCAGAC
TACCTAGTGG ACATCTCCGG GGAGAAGATC CATGAGCCAT ACGTCGAAGA CAAACTCTTC
TCCCTCTTCT AA
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| Protein sequence | MKVGKLHPQL LRQLVLARRG AWRREVVVGP AVGEDAAIID LGGAYLVVHT DPISGSVKLV
GRLAVFVSTN DVAVRGVEPM WLSVSIFLPS AAGEGDLDEI ARQIDEAARE IGVAVVGGHT
EVTTAVTRPV VVATAMGVGR RYVTTGGARP GDYVLMTKYA GQEAASILAT DFGEEAVRRG
VDKSAVEAAK SFNISVIREA LALADFATSM HDPTEGGVAG GLAEIAYASG VSIVVDRGAV
LTRPEIEALC RAFGIDPLKT LSSGVLLATV PPNQLDAALN KLRGLGVPHA VIGRVVEKSD
YLVDISGEKI HEPYVEDKLF SLF
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