Gene Pcal_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0098 
Symbol 
ID4908174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp96892 
End bp98007 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content58% 
IMG OID640123850 
Producthypothetical protein 
Protein accessionYP_001055003 
Protein GI126458725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000100589 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGGAAGA GCTTAGTCGC TGTCGCCATT GTCGCAGTGC TGTATTTTTC GCTCTCGCTC 
TGGTTTGCCA TAACCGTGTT TTCAACCTAT GCCTCGACGT ACAACACGAC CAAGTACATC
ACTGAGGTAT TGAGCGCCAT TGATGGACAC CGCCCATCTT CAATACACTC CTGCTTGACC
TCATGCAATG TCGCAATGGG GGGCCCTCAC GTCCTAAACA TTGCGGTGGA CAACCCCTCC
GTGTACCCCC TTGTGCTACT GGCGCGAGAG ACACGCGGCA ACGCCACAGT CGCAGTAGTG
GCCTACGGCG CTCCCGCTAT TTCAATAGAG TTCAACAACA CGCTAGTAGT AACACCCTAC
CCCACGCACC CCCTCGTGGT TGCAAAGCCC CGGTACATAA TAGCGGACAA GTCAGCGAGC
GCCAACGTAG AGACGTTGCA GATCTTAGAC GCAAACATGG CCGTGGCGAC CCTCTCGCTG
TTGGCTGGTG TAATCGCATC AGCGCTCGCC TCAAGCCACT TTGCCAAAAA GCCCCTTGCG
AAAATGTACC ACGAGCTTTA CACAGCCCCG TGGAGACACC TGCTGTTCCC CTCGCTACTT
GCGGCAGGGC CAGCAATCCC CATCGCTCTC GCCCTCTACC AAGCAATGCG TCCATCGCTG
GGGGCGTACC TCCTCGTCGT GGGGCTAAAG CTCGTCTACC CTCTCTTACA CGCTCTCTTC
AAGGCCTACG TCTTGTCCAA GAGGCTCAGC CTTGCGGACA AGGTCGGCGT CTTGCACACC
GCCGATCTCT TCCTAGTGTT CTGGGTAGTC CACTGGGCGT TTGACCCCCT CACGAACGTA
GTGGCGGCAA ACTGGGAGTT AGCGTATATG CTGGCCAGCA TCGCCTACGC CGCCTCGACG
TTTCTACTCG TCGTCGCCAC ATTTCTGCTC CCAGCCGCGT TGTTGCCCTT CTTTAGGCTG
AGGACGCTAC TCCTCCTCGT CCCCTTCGCC CTCAACGCAG AGCTCGCGGC CAGGAGAGAG
CTCTGCCAAC GGGCGCGCGG CTCCCTCCTG TGCGTTACTT TGACGGCAGA CGGCGAGAGG
CACAGCGGCG TAGTACCGCA TGCAACGATG ACGTAA
 
Protein sequence
MGKSLVAVAI VAVLYFSLSL WFAITVFSTY ASTYNTTKYI TEVLSAIDGH RPSSIHSCLT 
SCNVAMGGPH VLNIAVDNPS VYPLVLLARE TRGNATVAVV AYGAPAISIE FNNTLVVTPY
PTHPLVVAKP RYIIADKSAS ANVETLQILD ANMAVATLSL LAGVIASALA SSHFAKKPLA
KMYHELYTAP WRHLLFPSLL AAGPAIPIAL ALYQAMRPSL GAYLLVVGLK LVYPLLHALF
KAYVLSKRLS LADKVGVLHT ADLFLVFWVV HWAFDPLTNV VAANWELAYM LASIAYAAST
FLLVVATFLL PAALLPFFRL RTLLLLVPFA LNAELAARRE LCQRARGSLL CVTLTADGER
HSGVVPHATM T