Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0098 |
Symbol | |
ID | 4908174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 96892 |
End bp | 98007 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640123850 |
Product | hypothetical protein |
Protein accession | YP_001055003 |
Protein GI | 126458725 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000100589 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGGAAGA GCTTAGTCGC TGTCGCCATT GTCGCAGTGC TGTATTTTTC GCTCTCGCTC TGGTTTGCCA TAACCGTGTT TTCAACCTAT GCCTCGACGT ACAACACGAC CAAGTACATC ACTGAGGTAT TGAGCGCCAT TGATGGACAC CGCCCATCTT CAATACACTC CTGCTTGACC TCATGCAATG TCGCAATGGG GGGCCCTCAC GTCCTAAACA TTGCGGTGGA CAACCCCTCC GTGTACCCCC TTGTGCTACT GGCGCGAGAG ACACGCGGCA ACGCCACAGT CGCAGTAGTG GCCTACGGCG CTCCCGCTAT TTCAATAGAG TTCAACAACA CGCTAGTAGT AACACCCTAC CCCACGCACC CCCTCGTGGT TGCAAAGCCC CGGTACATAA TAGCGGACAA GTCAGCGAGC GCCAACGTAG AGACGTTGCA GATCTTAGAC GCAAACATGG CCGTGGCGAC CCTCTCGCTG TTGGCTGGTG TAATCGCATC AGCGCTCGCC TCAAGCCACT TTGCCAAAAA GCCCCTTGCG AAAATGTACC ACGAGCTTTA CACAGCCCCG TGGAGACACC TGCTGTTCCC CTCGCTACTT GCGGCAGGGC CAGCAATCCC CATCGCTCTC GCCCTCTACC AAGCAATGCG TCCATCGCTG GGGGCGTACC TCCTCGTCGT GGGGCTAAAG CTCGTCTACC CTCTCTTACA CGCTCTCTTC AAGGCCTACG TCTTGTCCAA GAGGCTCAGC CTTGCGGACA AGGTCGGCGT CTTGCACACC GCCGATCTCT TCCTAGTGTT CTGGGTAGTC CACTGGGCGT TTGACCCCCT CACGAACGTA GTGGCGGCAA ACTGGGAGTT AGCGTATATG CTGGCCAGCA TCGCCTACGC CGCCTCGACG TTTCTACTCG TCGTCGCCAC ATTTCTGCTC CCAGCCGCGT TGTTGCCCTT CTTTAGGCTG AGGACGCTAC TCCTCCTCGT CCCCTTCGCC CTCAACGCAG AGCTCGCGGC CAGGAGAGAG CTCTGCCAAC GGGCGCGCGG CTCCCTCCTG TGCGTTACTT TGACGGCAGA CGGCGAGAGG CACAGCGGCG TAGTACCGCA TGCAACGATG ACGTAA
|
Protein sequence | MGKSLVAVAI VAVLYFSLSL WFAITVFSTY ASTYNTTKYI TEVLSAIDGH RPSSIHSCLT SCNVAMGGPH VLNIAVDNPS VYPLVLLARE TRGNATVAVV AYGAPAISIE FNNTLVVTPY PTHPLVVAKP RYIIADKSAS ANVETLQILD ANMAVATLSL LAGVIASALA SSHFAKKPLA KMYHELYTAP WRHLLFPSLL AAGPAIPIAL ALYQAMRPSL GAYLLVVGLK LVYPLLHALF KAYVLSKRLS LADKVGVLHT ADLFLVFWVV HWAFDPLTNV VAANWELAYM LASIAYAAST FLLVVATFLL PAALLPFFRL RTLLLLVPFA LNAELAARRE LCQRARGSLL CVTLTADGER HSGVVPHATM T
|
| |