Gene Pcal_0096 details

Gene Information

• Locus tag: Pcal_0096
• ID: 4909817
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 95652
• End bp: 96278
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640123848
• Product: hypothetical protein
• Protein accession: YP_001055001
• Protein GI: 126458723

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 5
• Fosmid unclonability p-value: 0.00000191113
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCTCCCCC TATTTAGGCT CAGGACGCTA CTCCTCTTCA TGCCCTTCGC TCTCAACTAC 
GAGCTGGCGG CGAGGGAGGA GTTCTGCAGG CGGACACGGA GCCGTCTCGT CGCCGTGGCG 
CTTGAGGCAG AGGGGAGGGT CTACAGGGGC GTGGTGACGG CCTGCGACGG GGACGTGGTA 
GTCGTAGAGG GCAAGGAGGG GGAGTACGTG GTGCCGTGGA GCAAGGTGGA CCACGTGCTG 
GAGGCCAGGG AGGTGGCAGA CCTCGGGAGG GGCGAGGCCA AGGCCCTGCT GAAGAGGGCT 
GGGAGGGGAA GCGTCGTGGT TGTGCATAGG GGAGGCGCCG CGCCATACCT CTACATATGC 
GCCGAGGGGA GGGACTGCGA AATAGCCTTC GAGGGGAGAC TTCCCGTTGC CGGCGGAGAG 
GCCGTGGGGC GGGGAAGCGC CGTGGTGAAG TGCGGCGGCA AGAAGGTGCG CCTAGACGCG 
GCGCCAGGCG ACGCGGCGGA GGGCACAGCC CACTACACAT GCCCCACGAG ATTCAAAGTC 
GCCGTGGTGG CCCTTGGCCC CACCCGCGTA GAGCCAAGAG GGTGCTGGCC AGCAGAGGAG 
TCGCCCTACG TCATAGAAAA GGCGTAG 

 

Protein sequence

MLPLFRLRTL LLFMPFALNY ELAAREEFCR RTRSRLVAVA LEAEGRVYRG VVTACDGDVV 
VVEGKEGEYV VPWSKVDHVL EAREVADLGR GEAKALLKRA GRGSVVVVHR GGAAPYLYIC 
AEGRDCEIAF EGRLPVAGGE AVGRGSAVVK CGGKKVRLDA APGDAAEGTA HYTCPTRFKV 
AVVALGPTRV EPRGCWPAEE SPYVIEKA