Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0088 |
Symbol | |
ID | 4908792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 87763 |
End bp | 89196 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640123841 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001054994 |
Protein GI | 126458716 |
COG category | [B] Chromatin structure and dynamics [K] Transcription |
COG ID | [COG1243] Histone acetyltransferase |
TIGRFAM ID | [TIGR01211] histone acetyltransferase, ELP3 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0202426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGATTTA TTCGGGCCGC CAGCGGCGTA CACGTCGTGG CCGTCATGAC GCACCCCATG CCTTGCCCAG GCCGTTGCAC CTTCTGCCCA ACTGCCAGAG ACGCCCCCAA GTCCTACCTC TCCGACAGCC CAGTGGTGCT GAGGGCCAAG AGGAGCGGCT ACGACCCCTA CCTCCAGACC GCCGGCAGAG TCAAAGTCTA CCTTGAAAAC GGCCACGTGC CCAGCAAAGT AGAGGTGGTG GTGATGGGGG GCACCTTCTC CGCCCTGCCC CGGGGGTACA GGGAGTGGTT TGTGGCAAAC GTCTACAAGG CGCTCAACGA CTACCCCAAC TGGGCGGCCA AGGCCGCGGA GTCCCCCTCG CTGGAGTTTG AGCAACTGCG CAACGAGGCC GCCCTCCTGA GAATGGTGGC GCTAGCCGTG GAGACTCGGC CGGACTACGT CGACGAGGGG GAGGTGGACT TCCTCCTCCA GCTGGGCGTC ACCAGGGTGG AGCTGGGGGT GCAGTCCATC TACGACGACG TCTTGGCTAA GGTGAAGAGG GGCCACGGGG CCAGGGAGGC CGCGGAGGCC ACTGCCCTTC TAAAGGACGC GGCGTATAAG GTGTGCTACC ACCTAATGCC CGGCCTCCCC GGAAGCGACC CAGACCGGGA CCTCGAGATG TTCAAGACAG TGTTCTCCGA CCCGGCCTAC ATGCCAGACT GCGTCAAGAT ATACCCCCTA TACGTCGTGC CGGGGACTGA GCTCTACGAG CAGTGGAGGC GCGGCGGGTA CAAGAGCTAC GACGAGGAGA CTTGGCTAGA GCTCTTGGCC AAGATCTACG CCTCTGTCCC CAGGTGGGCC AGAGTCATGA GACTCGGCCG CGACATACCT CTACACCACG TGGTAGATGG CCCAAGGTGG GGCAACATGC GGCAGGTGGT GTTGAAAAAG ATGGCCGAGG TGGGCCTCCC CTGCGTAGAG ATTAGGTGCC GCGAGGTTGG GGTCAAGTTA GCCAACGGGG CGCCGGTGGA GCCCGGGCCA ATTGAGATCA AGAGGGCGGT CTACGAGGCG TCTGGCGGCG TCGAGGTGTT TTTAGAAGCG GTGGGGCCCG ACGACACTCT ATACGGCATA CTAAGGCTTA GGATGCCCCA CGCCCCCAGG CGCCCAGAGC TCAGCCGCAG GACGGCCCTA GTGAGAGAGT TGCATGTGTA CGGCCCGGCG GTGCCCGTGG GGGAGAGGGG AATATGGTGG CAACACATGG GCATTGGGCG GAGACTCATG GCGGCGGCAG AGGAGGTAGC CAGAGAATTC GGCGCGCGCA AGGTGGCTGT CATATCTGGC GTGGGGGCGC GGGAGTACTA CAGAAAGCTT GGCTACGAGA GGTGTGGGCC CTACATGTGC AAGCCCCTAG AGAAGCCGCT GGGGCATGCA GACGAGGAGC TCATAACGGT GTAG
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Protein sequence | MRFIRAASGV HVVAVMTHPM PCPGRCTFCP TARDAPKSYL SDSPVVLRAK RSGYDPYLQT AGRVKVYLEN GHVPSKVEVV VMGGTFSALP RGYREWFVAN VYKALNDYPN WAAKAAESPS LEFEQLRNEA ALLRMVALAV ETRPDYVDEG EVDFLLQLGV TRVELGVQSI YDDVLAKVKR GHGAREAAEA TALLKDAAYK VCYHLMPGLP GSDPDRDLEM FKTVFSDPAY MPDCVKIYPL YVVPGTELYE QWRRGGYKSY DEETWLELLA KIYASVPRWA RVMRLGRDIP LHHVVDGPRW GNMRQVVLKK MAEVGLPCVE IRCREVGVKL ANGAPVEPGP IEIKRAVYEA SGGVEVFLEA VGPDDTLYGI LRLRMPHAPR RPELSRRTAL VRELHVYGPA VPVGERGIWW QHMGIGRRLM AAAEEVAREF GARKVAVISG VGAREYYRKL GYERCGPYMC KPLEKPLGHA DEELITV
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