Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0084 |
Symbol | |
ID | 4908317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 81749 |
End bp | 83788 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640123837 |
Product | replicative DNA helicase Mcm |
Protein accession | YP_001054990 |
Protein GI | 126458712 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1241] Predicted ATPase involved in replication control, Cdc46/Mcm family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.117672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTGAGG TTGAGCTTGA CCTTCTGAGG GATAAGATTA GGGAGTTTAT TACGTCGAAT GAGAAGGTGT CGGACGAGGT CATCAACATG ATTATTCAGC AGAAGAAGTC GCTTGAGGTG GACTTCCACG ACATTTTGAT GTTTGACAAG GGGCTAGCCG ACTTGTTTAT CGAGAGGCCT CGCCTCGTCT TGCCCGAGGC GGACAAGGTG GTCAAAGAGG TGGTGGAGGA GAAGGACCCG GAGACGGCTA AGAAGCTCCG TAGGTTCTAC TTCAGGGTGA GGGGGTCGCC TCTGGTGGTT CCGCTCAGGA AGTTGAGGTC TGAGTACATT GGCCGCTTGA TTAGGGTGGA GGGGATTGTG ACTAGGCAGA CTCCGCCTAA GCACTTCCTC TACAAGGCCC TCTACCGTTG TACTCAGTGC GGCTACGAGA TTGAGCTTGT GCAAGAGCTG GAGCGGCACG TGGAGCCCCC GGCCAAGTGC CCCAGGTGCG GCGCGTCGAA GAGCTTCACT CTTGTGACTG AGCTGAGCCA GTACATCGAT TGGCAGAAGG TGATTGTGCA AGAGAGGCCT GAGGATCTGC CGCCTGGCCA ACTGCCGAGG AGCGTCGAGG TCGTCCTCCT GGACGACTTG GTGGACTCTG TGAAGCCGGG CGACATAGTC TCGCTGACCG GCATAGTGGA CCTCACCTTG AGCGAGCTGA GGAAGGGGAG GCCCCCCATC GTCACCTCCT ACATACAGGG GGTCCACGTG GAGACTACCA ACAAGGAGCT TGTGGAGGAG ATAACTAGCG AGGACGAGCA GAAGATCTTG GAGCTGTCTA GGAGGCCCGA CGTGAGGGAG CTCATAGTGA GGTCCATTGC CCCCTCTATA TACGGCTACG AGGAGATAAA GGAGGCCATC GCCTGCCTCC TCTTCGGCGG CAACGAGATA GTGTACCCAG ACGGGGTGAG GGTGAGGGGC GACATCAACA TACTGCTGAT AGGCGACCCG GGAACCGCCA AGTCTCAGCT CCTCAAGTTC GTGGCCAAGA TAGCCCCCCG CGCCGTCTAC ACCACGGGCA AGGGGTCCTC TGCGGCTGGC CTCACCGCGG CCGTGGTGCG GGACAAGCTC ACGGGGGAGT TCTACCTAGA GGCCGGCGCC CTCGTCCTCG CAGACAAGGG CGTGGCGGTG ATCGACGAGA TAGACAAAAT GGACGCCAAG GACAGGGTAG CCCTCCACGA GGCCATGGAG CAGAACACCG TGTCTATAAG CAAGGCGGGC ATCGTGGCCA CTCTCAACGC GAGAGCCGCC GTCCTCGCCG CGGCCAACCC GGCCTTCGGC CGCTATTTGC CAAACCGCAC TGTGGCAGAG AACATCGACC TCCCCGTCTC CCTCCTCAGC CGCTTCGACC TCATCTTCGT GATCAGGGAC GAGCCCCGGG AGGACTTCGA CTCTGCAGTG GCCGGCCACA TCTTAGACCT CCACTCGGGG AAGACGCCCG AGGCCTTTAG AGACGTCCTC AGGCCTGACT TCCTCCGCAA GTACATAATG TACGCCAGGA GGTACGTGAG GCCCATCTTG AGCGAGGAGG CAAAGGAGAG GATAAAGGCA TTCTACCTGG AGATGAGGAG GCGCTACCAG GGGCCGGGCA CGGCCATCGC CATAACTGCG CGCCAGCTAG AGGCGTTGAT ACGTTTGACC ACCGCCGAGG CCAAGATGCG TCTCTCCCCA ATAGCCACCG CCGAAGACGC CGAGAGGGCC ATACGCCTCT ACCTAGCCTT CCTAAAGTCT GTGGGCATAG ACGTGGAGTC CGGCGCCATT GACATAGACG CCATACTCAC GGGAGTCCCC GCGTCCCGCC GCGAGGCCTA CATACGCGTA GTAGAGCTGT TAAAGAAGCT GGAGGAGATC GAGAAGGGGC CAGTCAAGGT AGACCTCTTA AAGGCGGAGG CAGAGAAGCT CGGCATACCC GGCCCCGAGG TGCAGCGCAT AATCGACTTG CTCATACGCA ACGGCGAGGC CTACACCCCG AGGCCCGGCT ACATAAAGCG CGTAGCCTAG
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Protein sequence | MLEVELDLLR DKIREFITSN EKVSDEVINM IIQQKKSLEV DFHDILMFDK GLADLFIERP RLVLPEADKV VKEVVEEKDP ETAKKLRRFY FRVRGSPLVV PLRKLRSEYI GRLIRVEGIV TRQTPPKHFL YKALYRCTQC GYEIELVQEL ERHVEPPAKC PRCGASKSFT LVTELSQYID WQKVIVQERP EDLPPGQLPR SVEVVLLDDL VDSVKPGDIV SLTGIVDLTL SELRKGRPPI VTSYIQGVHV ETTNKELVEE ITSEDEQKIL ELSRRPDVRE LIVRSIAPSI YGYEEIKEAI ACLLFGGNEI VYPDGVRVRG DINILLIGDP GTAKSQLLKF VAKIAPRAVY TTGKGSSAAG LTAAVVRDKL TGEFYLEAGA LVLADKGVAV IDEIDKMDAK DRVALHEAME QNTVSISKAG IVATLNARAA VLAAANPAFG RYLPNRTVAE NIDLPVSLLS RFDLIFVIRD EPREDFDSAV AGHILDLHSG KTPEAFRDVL RPDFLRKYIM YARRYVRPIL SEEAKERIKA FYLEMRRRYQ GPGTAIAITA RQLEALIRLT TAEAKMRLSP IATAEDAERA IRLYLAFLKS VGIDVESGAI DIDAILTGVP ASRREAYIRV VELLKKLEEI EKGPVKVDLL KAEAEKLGIP GPEVQRIIDL LIRNGEAYTP RPGYIKRVA
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