Gene Pcal_0077 details

Gene Information

• Locus tag: Pcal_0077
• ID: 4909927
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 71152
• End bp: 73044
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640123830
• Product: aldehyde ferredoxin oxidoreductase
• Protein accession: YP_001054983
• Protein GI: 126458705
• COG category: [C] Energy production and conversion
• COG ID: [COG2414] Aldehyde:ferredoxin oxidoreductase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 0.452416
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTATGGTG TGGCTGGTGC CGTTGTATAT ATTGATCTCT CAACTGGGCG CGTTGAGAAG 
ATAAAGTTGG GGGAGGAGGT TTATAAAAAG TTTTTGGGCG GTGTGGGGCT TGGCGCTTGG 
TTCCTCCTTT CTAGAATGGC GAAGGGCACG GACCCCCTGG GCCCTGGCAA TGTGCTTGGA 
TTTGTCTCAG GCTTGTTGAA TCTTTCCAAC GTGCCTCTCG CAGGGAGGTT TATGGCGGTG 
GGCAAGTCGC CTCTCACCGG CGGCTGGGGA GACGCAAACG CTGGCGGGAG GTTTGGCCCC 
AAGCTTAAGG AGGCTGGGTT TGACGCAGTT TTCATTTGCG GCGTTTCTGA GAAGCCCGTC 
TACATACTTA TCGAGAACGG CGAGGTGTAC ATAGAATCTG CGGCAGATCT GTGGGGGAAG 
ACGACGAAGG AGACCGAGGA CGAGCTTAGG CGGAGGCACA GGGGGGCGCA AGTGGTATCC 
ATAGGCCCCG CCGGGGAGAA GCAACAGTTG GTGGCGGCTA TTATAAACGA GTACGGTAGG 
GCTCTGGGGC GGTCGGGCCT TGGAGCAGTT ATGGGGAGCA AGAGGCTTAA GGCCGTGGTA 
GCAGTTGGAG ACAAGCGCGT CGAGGTCTAC GACAGAGATC TTCTGAGACA GAAAATTGTG 
GAAATAGTCC AGCTACAGAA GGGTCCCCGC GCCAGGGCGG CGGAAATTTG GCACAAGTAT 
GGGACCTTAT ACACGCTGGA GCCCAGCATA CTCTCCGGCG ACACGCCTCT GTACAACTGG 
AGGGGGCTGG GCTACGAGGA GGTGAAAAGG CTGGCAGAGG TCTACAAAGC AGACTACTTC 
ATTAAGGACA ATGTAAAGCC GTATGCCTGC GCCTCGTGTA CTGTGGCATG CGGCGCGTTG 
ATTAAAAGCC GCACCAAGTA TGGAGAAGTG GAGGGCCACA GAGCTGAGTA CGAAACCGCC 
TCTCTCTTTG GCCCAGCGCT ACTAAACCTA GACCGCGACT CCGTGGTGTA TATAAACGAG 
CTCTGCAACC TCTACGGCCT TGACACCATC TCCACGGCCA ACGTAGTGGG CTTTGCCATG 
GAGCTCTACG AGAGGGGGGT ATTGAGCGAG CGCGAAGTGG GCTTTCCACT GAAGTGGGGC 
GACGCCGAGG CGGTTATAAG GCTGGTGGAG CTCATTGGAA AAGGCGAGGG GATAGGCAGA 
GTCTTGGGCC AGGGGGTGAA AAAGGCCTGT GAAATAATTG GCAAAGGCGC GTGTGAGTAT 
GCCATGCACG TCGGCGGCCA AGAGCTCCCG GCGCATCACG TGAAATATCT GCCGGGCCTA 
GCGGTGACGT ATGTGGCAGA CCCAACCCCG GCGAGGCACA CAGCCGGCGG CGTACACTTC 
ATGGGAGAAG GTGGCAGATC TACGTGGACA CAGTTCGACT TTGGGATAAA CTTTGGCAAA 
GTAGAAAAGT ACGCCTACAA AGACAAGGGC AGAATAGCGG CTGTGTACGC AAAGGCGGCT 
CAGGTGGAAA ACTCGCTGGG GTTCTGCGCA TTTTCATCTC AAGTGGTATT CCGCACGTTG 
CCCTACGTGG AGTTGATATA TGCCTTCACC GGCCTCAAAT TTACGCCGCA GGAGTTGCTA 
GAGGTGGGCC ACAGAATACA GACAATGCGC AAGCTATTCA ATATAAGAGA GGGCGTAAAC 
CCCACCCAGT GGAAACTGCC AAAGAGGGCC CTGGAGTACC CCAAAGAGGG CCCACTCTCA 
GACGTAAAAA TGACGGAAGA AGACGTGGAG CTCATGAGGC GCGAATACTA CGAGGAAATG 
GGGTGGGACC CGGCCACCGG CGCGCCGCGC AGAGCCACGC TGGAGAAACT CGGCATACTA 
GACCTCGCAG AGGGCCTAGA CCTCCCCCCG TAG 

 

Protein sequence

MYGVAGAVVY IDLSTGRVEK IKLGEEVYKK FLGGVGLGAW FLLSRMAKGT DPLGPGNVLG 
FVSGLLNLSN VPLAGRFMAV GKSPLTGGWG DANAGGRFGP KLKEAGFDAV FICGVSEKPV 
YILIENGEVY IESAADLWGK TTKETEDELR RRHRGAQVVS IGPAGEKQQL VAAIINEYGR 
ALGRSGLGAV MGSKRLKAVV AVGDKRVEVY DRDLLRQKIV EIVQLQKGPR ARAAEIWHKY 
GTLYTLEPSI LSGDTPLYNW RGLGYEEVKR LAEVYKADYF IKDNVKPYAC ASCTVACGAL 
IKSRTKYGEV EGHRAEYETA SLFGPALLNL DRDSVVYINE LCNLYGLDTI STANVVGFAM 
ELYERGVLSE REVGFPLKWG DAEAVIRLVE LIGKGEGIGR VLGQGVKKAC EIIGKGACEY 
AMHVGGQELP AHHVKYLPGL AVTYVADPTP ARHTAGGVHF MGEGGRSTWT QFDFGINFGK 
VEKYAYKDKG RIAAVYAKAA QVENSLGFCA FSSQVVFRTL PYVELIYAFT GLKFTPQELL 
EVGHRIQTMR KLFNIREGVN PTQWKLPKRA LEYPKEGPLS DVKMTEEDVE LMRREYYEEM 
GWDPATGAPR RATLEKLGIL DLAEGLDLPP