Gene Pcal_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0052 
Symbol 
ID4910004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp53350 
End bp53691 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content51% 
IMG OID640123805 
Producthypothetical protein 
Protein accessionYP_001054958 
Protein GI126458680 
COG category[R] General function prediction only 
COG ID[COG0727] Predicted Fe-S-cluster oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTGG TGCTGGAGGA GGAGATAGAG GTGCTCAAAC GCGAGGCAGA GAAGATAGGC 
GTCAAGCTGG AGTTTGAGCC AATAGGCTCC TACAACGGCG TCAAGTTGTA CAAGTGGATT
ATCAGAGGGT GGTGCCCCTT CTACAAGGGC AAGTGCACTA TCCACGAGAA GAAGCCTCTC
GCCTGTAGAA TATACCCGCT CGTCCTAAAC CTCAAGACGG GCGAAATATA CCTCTCAGAG
AAGTGCCTAT GGGTAAAGGT AAATGGCCCA AAGCCCCTCG ACCACTTCCC CGCAGAGAAG
GAGGCAACGA AGAAACTATT GATAAAGCTA AGGATTAAGT AG
 
Protein sequence
MPVVLEEEIE VLKREAEKIG VKLEFEPIGS YNGVKLYKWI IRGWCPFYKG KCTIHEKKPL 
ACRIYPLVLN LKTGEIYLSE KCLWVKVNGP KPLDHFPAEK EATKKLLIKL RIK