Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0052 |
Symbol | |
ID | 4910004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 53350 |
End bp | 53691 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640123805 |
Product | hypothetical protein |
Protein accession | YP_001054958 |
Protein GI | 126458680 |
COG category | [R] General function prediction only |
COG ID | [COG0727] Predicted Fe-S-cluster oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTGG TGCTGGAGGA GGAGATAGAG GTGCTCAAAC GCGAGGCAGA GAAGATAGGC GTCAAGCTGG AGTTTGAGCC AATAGGCTCC TACAACGGCG TCAAGTTGTA CAAGTGGATT ATCAGAGGGT GGTGCCCCTT CTACAAGGGC AAGTGCACTA TCCACGAGAA GAAGCCTCTC GCCTGTAGAA TATACCCGCT CGTCCTAAAC CTCAAGACGG GCGAAATATA CCTCTCAGAG AAGTGCCTAT GGGTAAAGGT AAATGGCCCA AAGCCCCTCG ACCACTTCCC CGCAGAGAAG GAGGCAACGA AGAAACTATT GATAAAGCTA AGGATTAAGT AG
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Protein sequence | MPVVLEEEIE VLKREAEKIG VKLEFEPIGS YNGVKLYKWI IRGWCPFYKG KCTIHEKKPL ACRIYPLVLN LKTGEIYLSE KCLWVKVNGP KPLDHFPAEK EATKKLLIKL RIK
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