Gene Pcal_0049 details

Gene Information

• Locus tag: Pcal_0049
• ID: 4908333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 51029
• End bp: 51628
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640123802
• Product: PaREP1/PaREP8 domain-contain protein
• Protein accession: YP_001054955
• Protein GI: 126458677

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACGCAC TTCAACACCT CGTCGACTTT ATCAAGAGGA AAAAACCCGA CGAAGACCCA 
GTGGCGTATC TCTATAGACT GGTCGAGGAG ACCCTAGACC CCAGCGAGCG CGTCGACTTC 
TACGTAGAGT CCTCCGAACA CTTCTGGCGT GAGGGGCTCG AGCTAGTGGA AAAAGGCGAG 
TTGAGACAGG GAAGCGAGAA AATTTGGAAC TCAGTGGTCC AATTAGTCAA AGCGGCCGCC 
GAAAAGAAGG GCCTTAAACA CCACACCCAC AGACTCGTGT GGGCCACCGT TAGGAAAATA 
GCCATGGAAC ACGACCCCGA GACTATCACC CTCTTCGCTG CAATAGAACA ACTCCACATA 
AACTTCTACG AAGGGCACTT AGACAAATGG GACGTGGAAA AGCTCACAGA AGCCGCGGCC 
AAGCTCAGAA AGGTGCTATT CGCGTACTCA ATGCAAATAA GGCAGGACAT GCGCAGTAAG 
ATAATTCGCA GTACATCCTC ACATCTTTTA TTCCTCAACC CCCTCTCTAC ACCACGGAGA 
TGTATCCTTA ACTCGAACCG CATACGCCCC CTACTTTCTC TACTGTATCT TGTAATATAA 

 

Protein sequence

MDALQHLVDF IKRKKPDEDP VAYLYRLVEE TLDPSERVDF YVESSEHFWR EGLELVEKGE 
LRQGSEKIWN SVVQLVKAAA EKKGLKHHTH RLVWATVRKI AMEHDPETIT LFAAIEQLHI 
NFYEGHLDKW DVEKLTEAAA KLRKVLFAYS MQIRQDMRSK IIRSTSSHLL FLNPLSTPRR 
CILNSNRIRP LLSLLYLVI