Gene Pcal_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0047 
Symbol 
ID4909990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp49022 
End bp50083 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content61% 
IMG OID640123800 
Producthypothetical protein 
Protein accessionYP_001054953 
Protein GI126458675 
COG category[R] General function prediction only 
COG ID[COG1341] Predicted GTPase or GTP-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACCA TCGAAGTGCC CCCAGGCCAC GCGGCGCTTG TAAAAGGCCC CGCAGAGGTC 
CTCTGCGCGG GCAAATGCGC CGTGTTCGGA GGCCACTTCG AGAGCTTCAC AGTACCTCCC
CACAAGCGGT ACCCAGTGGA GGGCCCCGCC ACGCTCAAGT TAAAAGGCGG CGAAGTCGCG
CTAGTGGCCG AGCCGGCCAT TCCGCCCGAC TGGGCCCTCG AGGCGGTGGA TGTGGTGGCC
CTCGTGGGGC CCACAGACGC TGGGAAGAGT AGCTTGGCCA CATTCCTCCT CAACGTGCAC
GTGGCCAGGG GGAAGAGGGT GTGCGTAGTA GACGCAGACG TGGGCCAGTC CGACATAGGG
CCCCCAGGCT TTGTGGCATA TAGTTGCACC TCGGCGCAAG TTCCACACAT CTCAGAGCTC
AGCCCCTTAA ACGCCTACTA CGTAGGCGCC GCGAATCTAC AGGGGCTTGA AGACCTCCTC
GTGGCGGGGG TAGTGTGGGC GTTGAAGGAG GCCATGTCCA CGTACCCCCA CCTCGTCTTA
ATAAACACCC CTGGGTGGAC CACTGGGAGG GGCTTGCAGT TGCTCAAGGC TTTGGCCGAC
GCCACAGCCG CCGAGGTTGT AAACATAGGC GAGAGGGTAT TGCCCGGCGC CGTGGTGTCA
CGGCCGAAGT ACGCCCTGCC CCGCGGCCCC CAAGAGAGGA AAGAGCTACG CGTCTACTCC
TACAGACGCC ACGTATCGCT GAGGGGAAAG GTCGCCGTAG AGCTCGACAA GCTTAGAAAC
TGCGCGTGGG ACAAAGGCCT GACCTGCCTC TGGGGCAGAT ACGTGGCCGC CGACGTGGAA
GAGCCGGAGA AAAAAGGCAG GGAATACGCA GTGCCCTCGC ACTACCTACG CCACATATTC
GCCGCCTTGT ACAAGGGCAA GAAGCTTGTG GGCTACGGCG TAGTAGAGAA GTTTGAGCCC
AAGCCAACCC TTTACGCATC GACGGAGGAC TTCGACGAGG TTTGGATAGG CAAAATTAGG
ATAGACCCCC ACACCCTAGA GGAGCTCGAC CCACTCCCCT GA
 
Protein sequence
MFTIEVPPGH AALVKGPAEV LCAGKCAVFG GHFESFTVPP HKRYPVEGPA TLKLKGGEVA 
LVAEPAIPPD WALEAVDVVA LVGPTDAGKS SLATFLLNVH VARGKRVCVV DADVGQSDIG
PPGFVAYSCT SAQVPHISEL SPLNAYYVGA ANLQGLEDLL VAGVVWALKE AMSTYPHLVL
INTPGWTTGR GLQLLKALAD ATAAEVVNIG ERVLPGAVVS RPKYALPRGP QERKELRVYS
YRRHVSLRGK VAVELDKLRN CAWDKGLTCL WGRYVAADVE EPEKKGREYA VPSHYLRHIF
AALYKGKKLV GYGVVEKFEP KPTLYASTED FDEVWIGKIR IDPHTLEELD PLP