Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0047 |
Symbol | |
ID | 4909990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 49022 |
End bp | 50083 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640123800 |
Product | hypothetical protein |
Protein accession | YP_001054953 |
Protein GI | 126458675 |
COG category | [R] General function prediction only |
COG ID | [COG1341] Predicted GTPase or GTP-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACCA TCGAAGTGCC CCCAGGCCAC GCGGCGCTTG TAAAAGGCCC CGCAGAGGTC CTCTGCGCGG GCAAATGCGC CGTGTTCGGA GGCCACTTCG AGAGCTTCAC AGTACCTCCC CACAAGCGGT ACCCAGTGGA GGGCCCCGCC ACGCTCAAGT TAAAAGGCGG CGAAGTCGCG CTAGTGGCCG AGCCGGCCAT TCCGCCCGAC TGGGCCCTCG AGGCGGTGGA TGTGGTGGCC CTCGTGGGGC CCACAGACGC TGGGAAGAGT AGCTTGGCCA CATTCCTCCT CAACGTGCAC GTGGCCAGGG GGAAGAGGGT GTGCGTAGTA GACGCAGACG TGGGCCAGTC CGACATAGGG CCCCCAGGCT TTGTGGCATA TAGTTGCACC TCGGCGCAAG TTCCACACAT CTCAGAGCTC AGCCCCTTAA ACGCCTACTA CGTAGGCGCC GCGAATCTAC AGGGGCTTGA AGACCTCCTC GTGGCGGGGG TAGTGTGGGC GTTGAAGGAG GCCATGTCCA CGTACCCCCA CCTCGTCTTA ATAAACACCC CTGGGTGGAC CACTGGGAGG GGCTTGCAGT TGCTCAAGGC TTTGGCCGAC GCCACAGCCG CCGAGGTTGT AAACATAGGC GAGAGGGTAT TGCCCGGCGC CGTGGTGTCA CGGCCGAAGT ACGCCCTGCC CCGCGGCCCC CAAGAGAGGA AAGAGCTACG CGTCTACTCC TACAGACGCC ACGTATCGCT GAGGGGAAAG GTCGCCGTAG AGCTCGACAA GCTTAGAAAC TGCGCGTGGG ACAAAGGCCT GACCTGCCTC TGGGGCAGAT ACGTGGCCGC CGACGTGGAA GAGCCGGAGA AAAAAGGCAG GGAATACGCA GTGCCCTCGC ACTACCTACG CCACATATTC GCCGCCTTGT ACAAGGGCAA GAAGCTTGTG GGCTACGGCG TAGTAGAGAA GTTTGAGCCC AAGCCAACCC TTTACGCATC GACGGAGGAC TTCGACGAGG TTTGGATAGG CAAAATTAGG ATAGACCCCC ACACCCTAGA GGAGCTCGAC CCACTCCCCT GA
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Protein sequence | MFTIEVPPGH AALVKGPAEV LCAGKCAVFG GHFESFTVPP HKRYPVEGPA TLKLKGGEVA LVAEPAIPPD WALEAVDVVA LVGPTDAGKS SLATFLLNVH VARGKRVCVV DADVGQSDIG PPGFVAYSCT SAQVPHISEL SPLNAYYVGA ANLQGLEDLL VAGVVWALKE AMSTYPHLVL INTPGWTTGR GLQLLKALAD ATAAEVVNIG ERVLPGAVVS RPKYALPRGP QERKELRVYS YRRHVSLRGK VAVELDKLRN CAWDKGLTCL WGRYVAADVE EPEKKGREYA VPSHYLRHIF AALYKGKKLV GYGVVEKFEP KPTLYASTED FDEVWIGKIR IDPHTLEELD PLP
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