Gene Pcal_0045 details

Gene Information

• Locus tag: Pcal_0045
• ID: 4908914
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 48102
• End bp: 48638
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640123798
• Product: hypothetical protein
• Protein accession: YP_001054951
• Protein GI: 126458673

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCCTCG ACGTCGCATA CCTAGCCCTA GGCGAGTTGG AGAACTTGTT GAAGCAGTAC 
GACGAGAAGC TCAAGGCCAT TGAAGAGGCG TGGAGGGCGT TCGTGGACTC TGCCACAAAG 
GCCAAGGCCA GTTGGGACGC CGACTTGCCC AAGGTCAAAA TACGCGTCGA CCAGCTCCGC 
AACGTGGTAG ACAGCTTAAA GAAGGAGATG GAAGTCCTCT TGGCCAAGAA GGAGCTGGGC 
TTAATCTCGG AAAGGGACTA CGCAACCCTC TCCGAGGAGT TGCAGAAGAA GATAGACGAG 
CTGGAGAAGC GGCTAGGGGA GTTCACAGAG AAAATCGCCG AGGTCGAGGG CAGAGTGAGA 
TACCTCTGGG CCAGGGCCTT GACGCGGGAG TATTTAAGCA AATTTGACCT GGTGGAACTT 
GAAAAGAGGA TAGAGGATGC AAAGGCCGCG GGGAAAATCG ACGATGAGAC TTACGCAAAG 
ATGAAGCAAG AGCTCGCCGT GATGAAAAGT GCTTGGGAGT TTCTAAACCT CCTCTAA 

 

Protein sequence

MSLDVAYLAL GELENLLKQY DEKLKAIEEA WRAFVDSATK AKASWDADLP KVKIRVDQLR 
NVVDSLKKEM EVLLAKKELG LISERDYATL SEELQKKIDE LEKRLGEFTE KIAEVEGRVR 
YLWARALTRE YLSKFDLVEL EKRIEDAKAA GKIDDETYAK MKQELAVMKS AWEFLNLL