Gene Pcal_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0042 
Symbol 
ID4909425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp46232 
End bp46564 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content52% 
IMG OID640123795 
Producthypothetical protein 
Protein accessionYP_001054948 
Protein GI126458670 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGAGGA CTTTGTGCCT AGGTCCCCGC TGCGTCTACG GCCCCAACAG CTCCTCGCTC 
TTCAGATGCG GAAAAAAGGC GTTGAAACCT ACAGTAAAGG GGAACAAAAT CGTATTCTGG
TGTACCTGGC TAAACGACGA GTGCATTGGC GCAAAATGTC AATACGCCTA CTGTGAGGCA
AGGGCCATGA CCCCAGAGGG GTATTGCACC TACAAGGCCG GAGGAGAGGA GGAGCCCAAG
AAGGACATCT TGGCCGAGGT AAAGAAGATA GAGAAGGAGG TAGAAAGAAT ACAAGTTCAT
CTGAAGAGAC GGGGCCTTGG AGATTACTTA TAG
 
Protein sequence
MQRTLCLGPR CVYGPNSSSL FRCGKKALKP TVKGNKIVFW CTWLNDECIG AKCQYAYCEA 
RAMTPEGYCT YKAGGEEEPK KDILAEVKKI EKEVERIQVH LKRRGLGDYL