Gene Pcal_0032 details

Gene Information

• Locus tag: Pcal_0032
• ID: 4909355
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 26406
• End bp: 29927
• Gene Length: 3522 bp
• Protein Length: 1173 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640123785
• Product: hypothetical protein
• Protein accession: YP_001054938
• Protein GI: 126458660

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCGTGTTT TGCTCTTCGC GCTCTTCCTC GCCGTTGCCG TGGCCGCTCT TGAGACTGAG 
CACTTTGTAA TTACGCCGGA CGACCCCACC CTGGCCAAGT ACTTGGAGGA TGCCTACAGC 
TTCTATGTTT CTAAGGGCCT CTCCCCGGCG CCCCCATGCC AGGGGGACAA GTACCGGGTG 
TACTATAATC AGTCTCTTGG GGATGTGTCC TACACGAAGC TTGGAGGGCG CTGCGTGTTA 
GAGGTCGACT TTGGCCGCTA CACGAGGAGG CTTGTGTTTC ACGAAGTGGG GCACGTCTTT 
TTGGCCAACT ACGACCCTGA CATATACGAC TACTTCTGGG CGAAGGAGGC GGCGCCGGAG 
GGCATGGCGT CTGTGGCCAC TGGGGTGTAC TACTTCCCCG CCATGTACTT CTCGGACAAG 
CTGTATTCCG TCAACCCCTT CTCCCTTGGC GAGGATAGGG TGTACGATTG GTATAAGTAC 
AGCGCCGCCG TCGCTTGGCA CCTCCAGCAG GCGTCTTCGT GGGAGTCTGT GCTCAAGGCC 
TTTCTCACGA GGAGTGGGGC GGCCAGGCTC TACGTCCAGT TCCTCTTGGC GCTTGCCAAG 
AGCGTGGAGC TTGGCGGCGT TAGGTACGAG CCCGAGCGGA AGGCCGTCAC ACTCTCGCCT 
GGGCCCTACT ACCTCTACCT GGACATCCCG GGCTACTCGG CGGTGTACTA CGAGTTTACT 
GCGCCGACGG GCTTGGTGAA GATTTCGGTG GACGACCCGC GCGTTGTGTC TAACCTATTG 
CTCAACAGAG AGTTCGAAGT GAGAAACGGC ACTCTCCTAG CCGCCTTTGT CAACAACTAC 
AGCGACACTG TACACGTGGC TGTGACTGTG TTTTTCACCC AGTTGCGCAC CTACTTGGCT 
GGCGGACGGT ATGAGGATGG GAAAATCTCT GTCAACTTGT GCGCCGAGCT CAACGGGGTC 
AAAATCAATG GAGTCGTAAA AGTAAACGGC TCGGAAGTCC GGCTCGCGGA TGGGTGCGGC 
GTCTACAACT TTACGGGCGT CTTAAGGCCT TATACCTTGG CGGTGGAGTA CGGCGGCTAC 
GCGGCCTATG TAAGACTTAA CTTGTCCCCA CCCGCCCTCG CGGCCTCTCC TTCCCGCCTC 
TTCCTCGGCG CGGGAGGCCG CGGCTACGTC AATGTGACTT TGTCAAATCC CAACCCCTTG 
TCTCTTGTCT GTTTTCTCAA CGCGGCGGCC TCCGGCGTCC AGTTCAACTC GTCTAAGGTG 
GCTGTGCCTC CCAATTCGAC GACTGTGTTT AAGCTGGGGT TTAAGGTGGT GGACAAGGTG 
GGCGGCAACG CCACGGTGAG TTGCGGCGTC GCCAACGCTA CAGTCCCCAT ATACGGGCTG 
TCATATAGCC TAAGCTACGA CTTAGACAGC GAGAGGGGGG TCTTGACGGC GTATTTCGGC 
TCTGAGCAGC GTAGCTACTC TGTTGGCAAG CTGCCCACCG ACGTGGAGCT TGTTTACGGC 
GGCTACGTGG CGGCTGTTGT CCACGTGGAG GCCCGCCTCT CTGTCTCTGT CTCGTCTCCC 
AAATTGGAGG GGGGCCTCCT CCGCTACGTC CTCTCAGTCG CCGTTGTTGG GCCGCCTTGG 
GCCAAGTTCA GCGGCGCCGC CTCCGTGGAT GGAGTTACGC GCGGCGTCTA TACAGGCGGC 
GTCTTGAACC TCACCGTGGC GTTGCGGCCA GGGGAGAGAA AGAGAGTCCT CGTGGGGGTG 
GGCAGGCTTG CTGAGTGGGT CAGCCTCGAG GCGCCGGAGG TGGTGGTGAA GGTGGAGCCC 
TTGGGGGCCG TGGTAGAGGG CGGCGTGGCT CGCATACTGG TGGGGCTTAG GTACAACGTA 
GAGGTCTCCT CTCCTCCGCC GCCGAACTTC GATGGCGCGC TCAGCGTTGA GCCTCTCCAG 
GGGGGCTTGG CTGTGGTCTC CTACCGCTAC GGCGAAAACG TCACTGTCGT GTACGAGGGC 
CGCGCCGCGG CGGCGGTGTA TTTGCCGAGG CCCAACGTGT CTCTGCTCCT CGTGGAGGGC 
ACAGTGCGGC CCAACAACTT CTCCGCGGTC TTTAAGGCCG TGGTCTCCGT GTGTAAGCCC 
TCGGTGGACG CCAGATATGT GGTAGAGGTT GGGGGCAGGC GGCTTGTGGT AAATGTGCCC 
AGGGGCGGAT GCGGCTTTAA CTTCACCGAG CTAACGTGGC ATAGCGCCTA CGGCCCCGTG 
TTAAACGTCT CCGTACCCAC CTCCTTTGGC CCCGCAACGG CACACCTCTA CGTGCCTCCG 
CCTAGGGTGG AGGCCCGCCT GCTCAACTGG ACTATCGACA AGGGGGGCGA GTCTGCCTTT 
GTAGAACTGA GGGTGGAGAC GCCCGGCAAC TACACCTACG TCGTGGCAGG GAGGGGGGTC 
CGCGGCTCTG CGTCGTTCGT CGTGGGGGTG CGGCCCAGCG GGGGCGTCGC AACGGTGGAC 
TACGGGTTCG GCGCCTTGAG CTTTACCCGG CCGCTGGCCG TGGTGGCCGC CCAGCCCATC 
TTGGCGGAGG TAGGCTCCTC GGCGCATATG CAGATTAGGG TCGAGGTACC CCAGGGGCTC 
TACATAAGGG GCGTCTTGGC CACCCCCTGG CTCAGCCGGG AGGTCTCCCT GGGGCCGGGC 
GTTTATACTG AGAGTGTGCC TGTGGACACG TCGGGGCGCC CCGGGGCTTA TGAGGTGGAG 
GTCAAGCTGG GCCCCTATGT GAACCGCACA ACAGTCGTCT TGTACAAGGT GGAGCTCTCC 
CTCTCGGCGC CCCGCCTCCT CCCCGTTGGC GCAACTGCCG AGGTGCAAGT GGTGGGCCGC 
GTGGAGCCGG CCGCTCCTGC AAGAGTGGCG GTTAGAGTCG AGGGGTGTGG TCTCTCTAGG 
GCCGACGTGG TGCCCCTCAA CGCCACTCTC CGCCTGTCCT CAAACGCCAC ATGCGCCGCG 
CGGATAGCCG CTGCCTCGAA CTCCACCTCG GCCGAGGCAA CGGTGGAGTG GGCCTCTTTG 
ACCGCTGGGC TGAATTACAC TCGGCTGGGC TCCCTCCGCG GCTTGCCCAT TTTCCCCGTA 
GGGGGCCTCC TCGCCGTACC TCTCCTCGGG GGGAGACAAG TGGATGGACG AGTGGAGGTG 
GTGGGGGACT TCCGCAGGCT CGGCCTCGTC AACTACACCA TACGCGTGAC GTATATGGGG 
GTGTCCAACG TCACTGAGTT CGTGGGCTTC GCAGTGCCGC CCGACGCCTA TACGGCGGCG 
AATAGGACGT ACGGCCTACT GCCCCCCGAG GCAAGGCCCT ACTACCGCTA CCTCCTCGAG 
AGAGCGGTGG CCACTGGGGA TTGGCGCCTC GTGGAGGACT TAGCCAAGCT GTACTCAGAA 
CCCCCAACTC CCCTCACTCT GGCGGCTAGG GCCCTTGTTG AGATGAGCTT GGCCTCGGGG 
AGAGAGCCAA ACATGGGTGT AGTCGAGACT CTGCGCAAGG TGGAGCCGCT CCTCTTAGGC 
GTCGCTGGCG GATTTCTCCT GGCCCTCCTA AGGAGGCTTT AA 

 

Protein sequence

MRVLLFALFL AVAVAALETE HFVITPDDPT LAKYLEDAYS FYVSKGLSPA PPCQGDKYRV 
YYNQSLGDVS YTKLGGRCVL EVDFGRYTRR LVFHEVGHVF LANYDPDIYD YFWAKEAAPE 
GMASVATGVY YFPAMYFSDK LYSVNPFSLG EDRVYDWYKY SAAVAWHLQQ ASSWESVLKA 
FLTRSGAARL YVQFLLALAK SVELGGVRYE PERKAVTLSP GPYYLYLDIP GYSAVYYEFT 
APTGLVKISV DDPRVVSNLL LNREFEVRNG TLLAAFVNNY SDTVHVAVTV FFTQLRTYLA 
GGRYEDGKIS VNLCAELNGV KINGVVKVNG SEVRLADGCG VYNFTGVLRP YTLAVEYGGY 
AAYVRLNLSP PALAASPSRL FLGAGGRGYV NVTLSNPNPL SLVCFLNAAA SGVQFNSSKV 
AVPPNSTTVF KLGFKVVDKV GGNATVSCGV ANATVPIYGL SYSLSYDLDS ERGVLTAYFG 
SEQRSYSVGK LPTDVELVYG GYVAAVVHVE ARLSVSVSSP KLEGGLLRYV LSVAVVGPPW 
AKFSGAASVD GVTRGVYTGG VLNLTVALRP GERKRVLVGV GRLAEWVSLE APEVVVKVEP 
LGAVVEGGVA RILVGLRYNV EVSSPPPPNF DGALSVEPLQ GGLAVVSYRY GENVTVVYEG 
RAAAAVYLPR PNVSLLLVEG TVRPNNFSAV FKAVVSVCKP SVDARYVVEV GGRRLVVNVP 
RGGCGFNFTE LTWHSAYGPV LNVSVPTSFG PATAHLYVPP PRVEARLLNW TIDKGGESAF 
VELRVETPGN YTYVVAGRGV RGSASFVVGV RPSGGVATVD YGFGALSFTR PLAVVAAQPI 
LAEVGSSAHM QIRVEVPQGL YIRGVLATPW LSREVSLGPG VYTESVPVDT SGRPGAYEVE 
VKLGPYVNRT TVVLYKVELS LSAPRLLPVG ATAEVQVVGR VEPAAPARVA VRVEGCGLSR 
ADVVPLNATL RLSSNATCAA RIAAASNSTS AEATVEWASL TAGLNYTRLG SLRGLPIFPV 
GGLLAVPLLG GRQVDGRVEV VGDFRRLGLV NYTIRVTYMG VSNVTEFVGF AVPPDAYTAA 
NRTYGLLPPE ARPYYRYLLE RAVATGDWRL VEDLAKLYSE PPTPLTLAAR ALVEMSLASG 
REPNMGVVET LRKVEPLLLG VAGGFLLALL RRL